CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0332200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os02g0332200 AK067672.1 - T-complex protein 1 delta subunit 2e-29 At3g18190 chaperonin, putative S.X. H.G.
0.61 81.2 Os07g0209000 AK058399.1 - Dolichyl-di-phosphooligosaccharide-proteinglycotransferase (Oligosaccharyltransferase)-like 1e-24 At5g66680 DGL1 S.X. H.G.
0.57 77.0 Os06g0538000 AK069949.1 - Chaperonin Cpn60/TCP-1 family protein 5e-83 At5g26360 chaperonin, putative S.X. H.G.
0.57 77.0 Os05g0147400 AK062146.1 - T-complex protein 1, zeta subunit (TCP-1-zeta)(CCT-zeta) (CCT-zeta- 1) 6e-67 At5g16070 chaperonin, putative S.X. H.G.
0.53 71.3 Os08g0207000 AK058705.1 - 40S ribosomal protein S11 (S18) (YS12) (RP41) 4e-60 At3g48930 EMB1080 (embryo defective 1080) S.X. H.G.
0.22 19.4 Os03g0851000 AK060496.1 - Transcription factor homolog BTF3-like protein 8e-12 At1g17880 nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.1 98.0 GSM275408 Bala root tip_At the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
7.5 97.5 GSM275410 Bala root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
6.9 97.3 GSM275414 Azucena root tip_Before the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
6.9 97.3 GSM275409 Bala root tip_At the wax layer_rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
6.2 97.1 GSM275407 Azucena root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
6.0 97.0 GSM275416 Azucena root tip_Before the wax layer_Rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
5.3 96.7 GSM275406 Azucena root tip_At the wax layer_rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
5.2 96.7 GSM409431 9311_young panicle 2cm, biological rep2 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
4.9 96.5 GSM409430 9311_young panicle 2cm, biological rep1 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
4.9 96.5 GSM302921 root_rep2 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.71 0 825 Os10g0514600 AK070291.1 - T-complex protein 1 delta subunit 2e-4 At3g18190 chaperonin, putative C.G. S.X.
0.09 4e-8 61 Os04g0300401 9632.m02174 - - 4e+0 At5g45860 Bet v I allergen family protein C.G. S.X.
0.08 4e-14 81 Os05g0507500 9633.m04013 - - 4e-1 At4g18335 unknown protein C.G. S.X.
0.04 1e-4 50 Os01g0333700 NM_183890.1 - - 1e+0 At4g17310 unknown protein C.G. S.X.
0.04 5e-4 48 Os05g0531900 9633.m04267 - - 6e+0 At3g50510 LBD28 (LOB DOMAIN-CONTAINING PROTEIN 28) C.G. S.X.
0.01 3e-2 42 Os07g0163000 AK067700.1 - D-lactate dehydrogenase-like 8e-27 At5g06580 FAD linked oxidase family protein C.G. S.X.
0.01 3e-2 42 Os08g0490000 AK100183.1 - Basic helix-loop-helix dimerisation region bHLHdomain containing protein 3e-1 At1g69010 BIM2 (BES1-interacting Myc-like protein 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.34 2e-29 131 Arabidopsis thaliana At3g18190 821346 chaperonin, putative F:unfolded protein binding, protein binding, ATP binding;P:response to cadmium ion;C:unknown;BOMFPAV - - - C.G. S.X.
0.19 2e-27 125 Glycine max Gma.5713.1.S1_at BE821972 cytosolic chaperonin - 1e-100 At3g18190 chaperonin, putative C.G. S.X.
0.67 0 1530 Hordeum vulgare Contig4454_at Contig4454 - - 2e-26 At3g18190 chaperonin, putative C.G. S.X.
0.33 2e-58 228 Populus trichocarpa PtpAffx.210407.1.S1_at pmrna20453 hypothetical protein - 5e-144 At3g18190 chaperonin, putative C.G. S.X.
0.66 0 1302 Triticum aestivum Ta.1648.2.A1_at CA606613 - - 8e-23 At3g18190 chaperonin, putative C.G. S.X.
0.19 1e-46 186 Vitis vinifera 1622187_at CF516794 hypothetical protein LOC100262936 - 4e-119 At3g18190 chaperonin, putative C.G. S.X.
0.65 0 1398 Zea mays Zm.6601.1.S1_at BI361125 - - 6e-30 At3g18190 chaperonin, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006457 The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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