CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0330000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.51 68.7 Os02g0330000 9630.m02160 - Conserved hypothetical protein 1e+0 At3g50580 unknown protein S.X. H.G.
0.75 91.9 Os01g0662900 9629.m04542 - - 1e+0 At3g49845 - S.X. H.G.
0.73 91.1 Os08g0396400 9636.m03051 - - 4e+0 At5g22580 - S.X. H.G.
0.64 83.4 Os11g0213500 9630.m04131 - TPR-like domain containing protein 2e+0 At4g36240 zinc finger (GATA type) family protein S.X. H.G.
0.61 81.2 Os01g0230550 NM_188611.1 - - 3e-1 At3g17130 invertase/pectin methylesterase inhibitor family protein S.X. H.G.
0.58 77.0 Os07g0614400 AK103733.1 - Conserved hypothetical protein 5e-5 At1g72490 unknown protein S.X. H.G.
0.57 77.0 Os03g0776600 9631.m05531 - - 4e+0 At5g26790 unknown protein S.X. H.G.
0.56 76.3 Os12g0599000 9640.m03982 - - 3e-2 At3g14260 unknown protein S.X. H.G.
0.55 73.7 Os04g0113400 NM_187296.1 - - 2e-1 At1g10140 - S.X. H.G.
0.50 68.0 Os08g0360200 9636.m02684 - Conserved hypothetical protein 2e-1 At1g33055 unknown protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
37.0 99.8 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
35.9 99.8 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
33.4 99.8 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.0 99.7 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.9 99.6 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.1 99.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.6 99.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.7 99.4 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.5 99.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.3 99.3 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 3e-18 93 Os05g0177500 AU172534 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 2e+0 At1g78410 VQ motif-containing protein C.G. S.X.
0.11 9e-22 105 Os10g0149500 NM_194859.1 - - 1e+0 At1g09580 emp24/gp25L/p24 family protein C.G. S.X.
0.10 5e-45 182 Os02g0207400 9630.m01045 - - 2e-1 At4g34135 UGT73B2 (UDP-GLUCOSYLTRANSFERASE 73B2) C.G. S.X.
0.10 3e-37 157 Os02g0206100 AK066593.1 - The start codon is not identified. 4e+0 At3g60550 CYCP3 C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At3g50580 824222 unknown protein F:unknown;P:unknown;C:endomembrane system;MOBPFVA - - - C.G. S.X.
0.04 5e-1 36 Glycine max PsAffx.psZG009xI20f_s_at PsAffx.psZG009xI20f - - 2e+0 At2g25080 ATGPX1 (GLUTATHIONE PEROXIDASE 1) C.G. S.X.
0.08 7e-4 44 Hordeum vulgare HR01O04u_at HR01O04u - - 1e+0 At4g35860 ATGB2 (GTP-BINDING 2) C.G. S.X.
0.04 5e-1 36 Populus trichocarpa Ptp.7809.1.S1_at DN499535 - - 4e-2 At1g78580 ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE) C.G. S.X.
0.17 3e-29 129 Triticum aestivum TaAffx.99042.1.A1_at CK211682 - - 1e+0 At1g75190 unknown protein C.G. S.X.
0.03 4e-1 34 Vitis vinifera 1611046_at CF511863 hypothetical protein LOC100251124 /// hypothetical protein LOC100256282 - 2e+0 At3g16660 unknown protein C.G. S.X.
0.03 6e-4 44 Zea mays Zm.59.1.S1_at L34847.1 IAA-glu synthetase - 2e-1 At4g15280 UGT71B5 (UDP-GLUCOSYL TRANSFERASE 71B5) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage