CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0314600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.6 Os02g0314600 AK068924.1 - Peptidase A1, pepsin family protein 1e+0 At5g55570 unknown protein S.X. H.G.
0.91 98.9 Os05g0127300 AK106429.1 - Cytokinin-regulated kinase 1 2e-2 At1g78980 SRF5 (STRUBBELIG-RECEPTOR FAMILY 5) S.X. H.G.
0.73 91.1 Os03g0787000 AK065950.1 - Syntaxin 1e-2 At5g61270 PIF7 (PHYTOCHROME-INTERACTING FACTOR7) S.X. H.G.
0.55 73.7 Os01g0934100 AK100995.1 - C2 domain containing protein 7e-1 At5g62720 integral membrane HPP family protein S.X. H.G.
0.50 68.0 Os01g0582600 9629.m03821 - Conserved hypothetical protein 7e-5 At4g29780 unknown protein S.X. H.G.
0.40 51.1 Os11g0163800 AK105532.1 - Protein of unknown function DUF793 family protein 9e-1 At4g08380 proline-rich extensin-like family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.5 98.5 GSM375766 gid1-3_ shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
12.5 98.3 GSM375767 gid1-3_ shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
11.2 98.2 GSM375765 gid1-3_ shoot_replicate 1 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
9.3 97.9 GSM375648 Taichung 65_shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
8.3 97.7 GSM375647 Taichung 65_shoot_replicate 1 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
8.1 97.7 GSM154831 Root_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
8.0 97.6 GSM154829 Root_DMSO-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
7.8 97.6 GSM375649 Taichung 65_shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
7.6 97.5 GSM375772 gid2-1_ shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
6.6 97.3 GSM375777 slr1 (k1001)_ shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 3e-8 61 Os04g0677100 9632.m05672 - Peptidase A1, pepsin family protein 4e-2 At2g18530 protein kinase family protein C.G. S.X.
0.06 1e-7 59 Os09g0452400 AK063358.1 - Peptidase A1, pepsin family protein 5e-2 At5g33340 CDR1 (CONSTITUTIVE DISEASE RESISTANCE 1) C.G. S.X.
0.06 5e-7 57 Os08g0267300 AK105097.1 - Peptidase A1, pepsin family protein 9e-8 At5g23750 remorin family protein C.G. S.X.
0.06 2e-6 56 Os08g0469000 9636.m03670 - Peptidase A1, pepsin family protein 2e-1 At5g33340 CDR1 (CONSTITUTIVE DISEASE RESISTANCE 1) C.G. S.X.
0.05 1e-7 59 Os08g0469100 AK108789.1 - Peptidase aspartic family protein 3e+0 At5g33340 CDR1 (CONSTITUTIVE DISEASE RESISTANCE 1) C.G. S.X.
0.04 3e-8 61 Os04g0448300 AK109494.1 - Peptidase A1, pepsin family protein 1e-2 At2g42980 aspartyl protease family protein C.G. S.X.
0.03 2e-9 65 Os04g0312500 9632.m02312 - - 2e+0 At5g62900 unknown protein C.G. S.X.
0.02 1e-7 59 Os12g0177500 AK064771.1 - Peptidase A1, pepsin family protein 4e-3 At1g77480 nucellin protein, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e+0 36 Arabidopsis thaliana At5g55570 835651 unknown protein F:unknown;P:unknown;C:chloroplast;PM - - - C.G. S.X.
0.02 9e-2 40 Glycine max Gma.542.1.S1_at CD400586 - - 4e-1 At4g37790 HAT22 C.G. S.X.
0.07 5e-10 65 Hordeum vulgare Contig11048_at Contig11048 - - 9e+0 At5g51545 LPA2 (low psii accumulation2) C.G. S.X.
0.02 3e-1 38 Populus trichocarpa PtpAffx.217966.1.S1_at pmrna33451 hypothetical protein - 4e-1 At1g08500 plastocyanin-like domain-containing protein C.G. S.X.
0.21 9e-60 232 Triticum aestivum TaAffx.83228.1.S1_at CA660041 - - 2e-1 At5g11500 unknown protein C.G. S.X.
0.02 2e-2 40 Vitis vinifera 1609442_at CF373210 hypothetical protein LOC100243127 - 3e-4 At3g05800 transcription factor C.G. S.X.
0.39 3e-147 521 Zea mays Zm.9124.1.A1_at CO524970 hypothetical protein LOC100279644 - 9e+0 At4g01680 MYB55 (myb domain protein 55) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006508 The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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