CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0307400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 81.2 Os02g0307400 9630.m01958 - - 1e+0 At5g55710 - S.X. H.G.
0.56 76.3 Os06g0476000 9634.m02689 - - 3e+0 At3g17090 protein phosphatase 2C family protein / PP2C family protein S.X. H.G.
0.55 73.7 Os10g0571900 NM_197841.1 - RmlC-like cupin family protein 3e+0 At2g13980 nucleic acid binding S.X. H.G.
0.46 60.9 Os02g0590700 AK100917.1 - Conserved hypothetical protein 4e-2 At3g20860 ATNEK5 (NIMA-RELATED KINASE5) S.X. H.G.
0.44 58.1 Os07g0543600 9635.m05023 - Strictosidine synthase family protein 8e+0 At5g54145 unknown protein S.X. H.G.
0.42 53.9 Os02g0598600 AK105564.1 - Cyclin-like F-box domain containing protein 6e-1 At4g01600 GRAM domain-containing protein / ABA-responsive protein-related S.X. H.G.
0.41 52.4 Os05g0234700 9632.m01094 - HAT dimerisation domain containing protein 6e-2 At4g09660 - S.X. H.G.
0.40 51.1 Os02g0146200 9630.m00446 - - 1e-1 At1g62350 - S.X. H.G.
0.36 44.0 Os04g0651601 9632.m05429 - - 3e-1 At5g40950 RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27) S.X. H.G.
0.30 32.7 Os07g0196800 9635.m00947 - - 3e-1 At2g47560 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
40.8 99.9 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
37.6 99.8 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
37.5 99.8 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.4 99.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.9 99.6 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.1 99.3 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.9 99.3 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.9 99.3 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.4 99.3 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.8 99.2 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 1e-57 226 Os08g0543000 9636.m04375 - NBS-LRR type resistance protein (Fragment) 5e-1 At3g33520 ATARP6 C.G. S.X.
0.13 7e-28 127 Os08g0542200 AK099583.1 - - 4e-1 At5g03070 IMPA-9 (IMPORTIN ALPHA ISOFORM 9) C.G. S.X.
0.12 1e-17 93 Os08g0543500 AK121394.1 - Disease resistance protein family protein 2e+0 At5g47740 - C.G. S.X.
0.07 9e-12 73 Os08g0543100 9636.m04377 - Disease resistance protein family protein 1e-1 At2g07340 prefoldin-related KE2 family protein C.G. S.X.
0.02 6e-10 67 Os10g0201600 NM_195416.1 - - 3e+0 At5g50440 MEMB12 (MEMBRIN 12) C.G. S.X.
0.02 8e-3 44 Os02g0305300 9630.m01933 - Disease resistance protein family protein 1e+0 At2g32720 CB5-B (CYTOCHROME B5 ISOFORM B) C.G. S.X.
0.01 1e-4 50 Os08g0332600 9636.m02387 - Disease resistance protein family protein 1e+0 At5g25600 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e+0 36 Arabidopsis thaliana At5g55710 835665 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;OBP - - - C.G. S.X.
0.02 6e+0 34 Glycine max PsAffx.C35000040_at PsAffx.C35000040 - - 8e-1 At5g19810 proline-rich extensin-like family protein C.G. S.X.
0.12 9e-9 61 Hordeum vulgare AF032687_at AF032687 - - 2e+0 At3g52130 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.03 9e-2 40 Populus trichocarpa PtpAffx.225833.1.S1_x_at pmrna45450 NBS resistance protein - 9e-2 At2g38630 - C.G. S.X.
0.01 4e+0 34 Triticum aestivum TaAffx.101059.1.S1_at CA605636 - - 2e-9 At2g26930 ATCDPMEK (4-(CYTIDINE 5'-PHOSPHO)-2-C-METHYL-D-ERITHRITOL KINASE) C.G. S.X.
0.01 1e+0 34 Vitis vinifera 1617653_at CA818371 hypothetical protein LOC100260671 - 5e-2 At4g39280 phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative C.G. S.X.
0.01 7e+0 32 Zea mays ZmAffx.1287.1.S1_at 40794996-134 - - 9e-1 At1g21950 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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