CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0303100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.56 76.3 Os02g0303100 9630.m01912 - - 4e+0 At5g67450 AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1) S.X. H.G.
0.67 87.2 Os12g0255800 9640.m01494 - - 5e+0 At5g10310 unknown protein S.X. H.G.
0.63 82.7 Os05g0212000 9633.m01079 - - 4e-2 At2g20613 unknown protein S.X. H.G.
0.60 79.7 Os10g0134600 9638.m00362 - - 1e+0 At1g55310 SR33 S.X. H.G.
0.60 79.7 Os09g0305900 9637.m01087 - - 4e-1 At5g53180 PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2) S.X. H.G.
0.50 68.0 Os01g0204500 NM_188331.1 - - 3e-1 At1g72640 binding / catalytic S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
148.8 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
138.5 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
123.0 100.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
4.3 96.1 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.2 94.9 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
1.4 88.7 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
1.2 86.9 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
1.1 85.9 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.9 83.3 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.8 81.7 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 1e-137 492 Os02g0303200 AK107731.1 - Hypothetical protein 1e+0 At3g26060 ATPRX Q C.G. S.X.
0.01 9e-3 44 Os03g0293500 AK119500.1 - Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1)(PDC) (Fragment) 2e-24 At5g01320 pyruvate decarboxylase, putative C.G. S.X.
0.01 4e-2 42 Os07g0296000 AK073416.1 - Conserved hypothetical protein 5e-1 At4g29520 - C.G. S.X.
0.01 1e-1 40 Os10g0160100 AK073394.1 - Glycoside hydrolase, family 17 protein 1e-2 At5g42100 ATBG_PAP C.G. S.X.
0.01 5e-1 38 Os06g0105600 AK106556.1 - Hypothetical protein 3e-4 At5g47480 unknown protein C.G. S.X.
0.01 5e-1 38 Os06g0608300 AK102908.1 - 116 kDa U5 small nuclear ribonucleoproteincomponent (U5 snRNP- specific protein, 116 kDa) (U5-116kDa) 1e-25 At1g06220 MEE5 (MATERNAL EFFECT EMBRYO ARREST 5) C.G. S.X.
0.01 5e-1 38 Os11g0572100 AB109200.1 - DNA ligase (EC 6.5.1.2) 1e-20 At5g22010 AtRFC1 (replication factor C 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 4e+0 34 Arabidopsis thaliana At5g67450 836881 AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1) Encodes zinc-finger protein. mRNA levels are elevated in response to low temperature, cold temperatures and high salt. The protein is localized to the nucleus and acts as a transcriptional repressor. - - - C.G. S.X.
0.01 1e-1 40 Glycine max GmaAffx.40660.2.S1_at BG362604 - - 2e-1 At5g48680 sterile alpha motif (SAM) domain-containing protein C.G. S.X.
0.01 1e-1 38 Hordeum vulgare HV14P02u_at HV14P02u - - 4e+0 At3g06740 zinc finger (GATA type) family protein C.G. S.X.
0.01 2e+0 36 Populus trichocarpa PtpAffx.65241.1.A1_at CK087360 hypothetical protein - 2e+0 At5g46530 - C.G. S.X.
0.01 1e+0 36 Triticum aestivum Ta.3504.1.A1_at CK163751 - - 1e+0 At3g16150 L-asparaginase, putative / L-asparagine amidohydrolase, putative C.G. S.X.
0.01 1e+0 34 Vitis vinifera 1621918_at CF372689 hypothetical protein LOC100261281 - 2e-1 At1g28280 VQ motif-containing protein C.G. S.X.
0.02 5e-1 36 Zea mays Zm.12248.3.A1_at AI770379 Hypothetical protein LOC100216999 - 3e+0 At5g65660 hydroxyproline-rich glycoprotein family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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