CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0301000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.81 94.8 Os02g0301000 AK063049.1 - Zn-finger, C-x8-C-x5-C-x3-H type domain containingprotein 7e-8 At1g01350 nucleic acid binding / protein binding / zinc ion binding S.X. H.G.
0.65 83.8 Os11g0584100 AK069971.1 - Cyclin-like F-box domain containing protein 2e+1 At5g32597 unknown protein S.X. H.G.
0.64 83.4 Os08g0412100 AK072641.1 - Disease resistance protein family protein 2e+0 At2g28440 proline-rich family protein S.X. H.G.
0.59 78.0 Os04g0564500 9632.m04607 - Protein of unknown function DUF833 family protein 2e-3 At4g38260 unknown protein S.X. H.G.
0.52 69.6 Os10g0135300 AK072221.1 - Cyclin-like F-box domain containing protein 2e-2 At2g21060 ATGRP2B (GLYCINE-RICH PROTEIN 2B) S.X. H.G.
0.50 68.0 Os03g0782900 AK108367.1 - TPR-like domain containing protein 1e+0 At5g14080 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
0.50 68.0 Os02g0780800 9630.m05348 - Helicase, C-terminal domain containing protein 3e-1 At2g34480 60S ribosomal protein L18A (RPL18aB) S.X. H.G.
0.48 63.7 Os01g0170100 BI808778 - D111/G-patch domain containing protein 9e-1 At1g22180 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein S.X. H.G.
0.42 53.9 Os03g0775400 AK107354.1 - TPR-like domain containing protein 1e+0 At3g61170 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
0.41 52.4 Os08g0484400 AK065727.1 - Bacterial Fmu (Sun)/eukaryotic nucleolarNOL1/Nop2p domain containing protein 4e-10 At2g22400 NOL1/NOP2/sun family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
77.1 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
23.0 99.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.3 99.2 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.4 99.1 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.3 99.0 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.3 98.9 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.4 98.9 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.0 98.8 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.6 98.8 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.2 98.8 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 6e-9 63 Os08g0394100 9636.m03029 - - 6e+0 At3g48490 unknown protein C.G. S.X.
0.05 4e-4 48 Os10g0392050 9638.m02132 - - 4e+0 At3g22110 PAC1 C.G. S.X.
0.03 5e+0 32 Os07g0490600 AK101803.1 - Zn-finger, Ran-binding domain containing protein 2e-3 At1g67325 binding / zinc ion binding C.G. S.X.
0.03 5e+0 32 Os08g0226700 9636.m01283 - - 1e+0 At2g15290 TIC21 (TRANSLOCON AT INNER MEMBRANE OF CHLOROPLASTS 21) C.G. S.X.
0.02 1e+0 34 Os01g0174600 AK107662.1 - Zn-finger, C-x8-C-x5-C-x3-H type domain containingprotein 2e-3 At5g36960 unknown protein C.G. S.X.
0.02 5e+0 32 Os03g0789900 AK106804.1 - Conserved hypothetical protein 4e-3 At2g43060 transcription factor C.G. S.X.
0.02 5e+0 32 Os03g0790000 AK105547.1 - Conserved hypothetical protein 3e-3 At2g43060 transcription factor C.G. S.X.
0.01 4e-4 48 Os08g0499200 AK120828.1 - Cl- channel, voltage gated family protein 1e-65 At1g55620 CLC-F (CHLORIDE CHANNEL F) C.G. S.X.
0.01 4e-4 48 Os09g0542800 9637.m03137 - TPR-like domain containing protein 2e-1 At3g61260 DNA-binding family protein / remorin family protein C.G. S.X.
0.01 1e+0 34 Os11g0649000 9639.m03960 - - 3e-2 At3g54990 SMZ (SCHLAFMUTZE) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.22 2e-35 151 Arabidopsis thaliana At5g06420 830530 zinc finger (CCCH-type/C3HC4-type RING finger) family protein F:protein binding, zinc ion binding, nucleic acid binding;P:unknown;C:membrane;MFOPB - - - C.G. S.X.
0.19 2e-20 101 Glycine max Gma.4975.1.S1_at BI970178 - - 6e-25 At5g06420 zinc finger (CCCH-type/C3HC4-type RING finger) family protein C.G. S.X.
0.55 2e-61 236 Hordeum vulgare Contig11392_at Contig11392 - - 1e-26 At5g06420 zinc finger (CCCH-type/C3HC4-type RING finger) family protein C.G. S.X.
0.07 5e-9 63 Populus trichocarpa PtpAffx.16154.1.S1_at DN485818 hypothetical protein - 5e-39 At1g01350 nucleic acid binding / protein binding / zinc ion binding C.G. S.X.
0.34 5e-82 305 Triticum aestivum Ta.5380.1.S1_a_at BU100377 - - 2e-24 At1g01350 nucleic acid binding / protein binding / zinc ion binding C.G. S.X.
0.03 6e-2 38 Vitis vinifera 1621077_s_at CB975305 hypothetical protein LOC100256381 - 2e-17 At3g51880 HMGB1 (HIGH MOBILITY GROUP B 1) C.G. S.X.
0.02 1e-3 44 Zea mays Zm.13417.1.A1_at CA400681 hypothetical protein LOC100193979 - 4e-1 At3g05830 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0016567 The process by which one or more ubiquitin moieties are added to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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