Gene omics information

Query gene ID Os02g0288100
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.9Os02g0288100AK107019.1-Pectinesterase6e-8At2g45220pectinesterase family proteinS.X.H.G.
0.8395.8Os08g0136500AK061187.1-Protein of unknown function DUF26 domaincontaining protein1e-1At1g08320bZIP family transcription factorS.X.H.G.
0.8395.8Os10g0451700AK103350.1-Glycine-rich cell wall structural protein 2precursor3e-2At1g62240unknown proteinS.X.H.G.
0.8395.8Os11g0701900AK064281.1-Glycoside hydrolase, family 18 protein9e+0At4g17240unknown proteinS.X.H.G.
0.7189.6Os05g0104700AK108676.1-Leucine-rich repeat, plant specific containingprotein3e+0At1g12630DNA binding / transcription activator/ transcription factorS.X.H.G.
0.6787.2Os11g0701400D55710.1-Chitinase (EC 3.2.1.14)9e+0At5g60840unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
170.5100.0GSM159272Rice coleoptiles, 4 days old, anoxic, REPLICATE 2 (Sample #12)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
93.5100.0GSM159271Rice coleoptiles, 4 days old, anoxic, REPLICATE 1 (Sample #11)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
10.598.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.598.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.798.0GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.697.9GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.597.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.997.8GSM377079Genomic DNA - 45 day old leaf sample - mutant g6686GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.697.8GSM195224Suspension cellGSE7951Genome-wide gene expression profiling of rice stigma
8.197.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.171e-38163Os01g0312500AK105998.1-Pectin methylesterase isoform alpha (EC 3.1.1.11)(Fragment)2e-2At3g14310ATPME3C.G.S.X.
0.131e-25119Os06g01932009634.m00885-Pectinesterase (EC 3.1.1.11) (Fragment)3e+0At3g06830pectinesterase family proteinC.G.S.X.
0.132e-22109Os01g0254300NM_187890.1-Pectinesterase (EC 3.1.1.11) (Fragment)1e-3At3g06830pectinesterase family proteinC.G.S.X.
0.114e-26121Os01g0788400AK109763.1-Pectinesterase (EC 3.1.1.11) (Pectinmethylesterase) (PE)2e-7At3g59010pectinesterase family proteinC.G.S.X.
0.107e-31137Os05g0361500AK100947.1-Pectinesterase family protein2e-5At1g02810pectinesterase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.066e-859Arabidopsis thalianaAt2g45220819130pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:membrane, plant-type cell wall;PBFOM---C.G.S.X.
0.051e-656Glycine maxGma.2182.1.S1_atCA784884--2e-1At3g14310ATPME3C.G.S.X.
0.158e-46184Hordeum vulgareContig13318_atContig13318--1e-2At3g59010pectinesterase family proteinC.G.S.X.
0.045e-654Populus trichocarpaPtpAffx.13217.1.S1_atCK320792--2e-6At5g53370PMEPCRF (PECTIN METHYLESTERASE PCR FRAGMENT F)C.G.S.X.
0.151e-1275Triticum aestivumTaAffx.65345.1.A1_atBJ249481--2e+0At1g23200pectinesterase family proteinC.G.S.X.
0.072e-1479Vitis vinifera1615574_atCB977067hypothetical protein LOC100245304-7e-9At2g45220pectinesterase family proteinC.G.S.X.
0.143e-2099Zea maysZm.14962.1.A1_atBM268018hypothetical protein LOC100280285-2e-1At3g59010pectinesterase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0042545The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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