CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0280500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os02g0280500 AK058486.1 - Glyoxalase I 1e-10 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative S.X. H.G.
0.40 51.1 Os01g0102600 AK064812.1 - Shikimate kinase domain containing protein 6e-4 At1g35460 basic helix-loop-helix (bHLH) family protein S.X. H.G.
0.38 46.9 Os04g0639300 AK058483.1 - Conserved hypothetical protein 2e-5 At2g21960 unknown protein S.X. H.G.
0.32 36.3 Os12g0498500 9640.m03045 - Heat shock protein DnaJ, N-terminal domaincontaining protein 3e-5 At5g21430 DNAJ heat shock N-terminal domain-containing protein S.X. H.G.
0.26 25.6 Os01g0761000 CF335135 - Conserved hypothetical protein 6e+0 At5g58280 transcriptional factor B3 family protein S.X. H.G.
0.25 24.1 Os08g0379400 AK112013.1 - Quinone oxidoreductase-like protein 8e-4 At1g23740 oxidoreductase, zinc-binding dehydrogenase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.6 98.1 GSM207559 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
10.3 98.1 GSM174888 C mock 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
9.7 98.0 GSM207560 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
9.1 97.9 GSM207558 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
9.1 97.9 GSM278846 WuYun3-RSV infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
8.5 97.7 GSM207564 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
8.4 97.7 GSM207562 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
8.3 97.7 GSM174890 G mock 4 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
8.1 97.7 GSM207563 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
6.9 97.3 GSM278851 KT95-418-RSV infected,biological rep2 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 3e-179 628 Os02g0280400 AK111701.1 - Protein kinase-like protein 9e-36 At4g28880 ckl3 (Casein Kinase I-like 3) C.G. S.X.
0.05 6e-5 50 Os08g0191700 AK066092.1 - Glyoxalase I family protein 2e-13 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.02 9e-1 36 Os02g0726700 AK068228.1 - Basic helix-loop-helix dimerisation region bHLHdomain containing protein 7e-1 At5g38860 BIM3 (BES1-interacting Myc-like protein 3) C.G. S.X.
0.01 9e-1 36 Os01g0273300 NM_188077.1 - BSD domain containing protein 4e-3 At3g11100 transcription factor C.G. S.X.
0.01 9e-1 36 Os03g0745000 AY332465.1 - Heat shock factor (HSF)-type, DNA-binding domaincontaining protein 2e-13 At3g22830 AT-HSFA6B C.G. S.X.
0.01 9e-1 36 Os05g0526800 AK066551.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 9e-1 At5g10950 cylicin-related C.G. S.X.
0.01 9e-1 36 Os10g0394200 9638.m02152 - SBT1 protein (Subtilisin-like protease) 2e-11 At3g14067 subtilase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.28 1e-10 67 Arabidopsis thaliana At1g67280 843048 lactoylglutathione lyase, putative / glyoxalase I, putative F:lactoylglutathione lyase activity, metal ion binding;P:response to cold, carbohydrate metabolic process;C:thylakoid, thylakoid lumen, stromule, chloroplast, chloroplast stroma;BOMFPA - - - C.G. S.X.
0.06 2e+0 34 Glycine max Gma.13292.1.S1_at CD396729 - - 2e-8 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.40 2e-118 424 Hordeum vulgare Contig7987_at Contig7987 - - 3e-15 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.13 3e-6 54 Populus trichocarpa Ptp.2633.1.S1_at CK095904 hypothetical protein - 2e-75 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.47 5e-112 404 Triticum aestivum Ta.28068.1.S1_at CD862522 Lgul protein - 2e-10 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.16 9e-6 50 Vitis vinifera 1609873_at CB341501 hypothetical protein LOC100247523 - 2e-69 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.11 2e-7 56 Zea mays Zm.17590.1.A1_at CK144918 hypothetical protein LOC100191237 - 3e-46 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0005975 The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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