CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0267700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 71.3 Os02g0267700 9630.m01566 - Alpha-expansin OsEXPA14 3e-5 At4g01630 ATEXPA17 (ARABIDOPSIS THALIANA EXPANSIN A17) S.X. H.G.
0.29 31.1 Os02g0461300 9630.m02478 - - 6e-2 At1g75550 glycine-rich protein S.X. H.G.
0.11 6.5 Os01g0653100 9629.m04442 - Protein of unknown function DUF231 domaincontaining protein 2e-4 At5g40180 unknown protein S.X. H.G.
0.08 4.2 Os12g0582633 9636.m04002 - - 6e-1 At3g46666 unknown protein S.X. H.G.
0.07 3.7 Os11g0152000 9639.m00458 - - 7e-1 At1g15220 CCMH S.X. H.G.
0.04 2.0 Os03g0560600 9631.m03462 - - 3e+0 At5g40370 glutaredoxin, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
32.8 99.8 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.0 99.7 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.7 99.6 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.0 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.5 99.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.4 99.5 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.8 99.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.8 99.5 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.4 99.5 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.1 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.82 0 902 Os02g0268600 9630.m01572 - Expansin family protein 4e-4 At2g39700 ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4) C.G. S.X.
0.70 3e-154 545 Os02g0268050 9630.m01571 - - 1e-1 At2g40610 ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8) C.G. S.X.
0.50 6e-128 458 Os02g0267200 9630.m01561 - Alpha-expansin OsEXPA13 2e-6 At1g20190 ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11) C.G. S.X.
0.30 6e-57 222 Os03g0428700 AK111273.1 - Alpha-expansin OsEXPA19 2e-3 At2g37640 EXP3 C.G. S.X.
0.24 2e-38 161 Os06g0718100 AK070133.1 - Expansin 4e-11 At2g39700 ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 3e-5 50 Arabidopsis thaliana At4g01630 827983 ATEXPA17 (ARABIDOPSIS THALIANA EXPANSIN A17) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) - - - C.G. S.X.
0.15 2e-6 54 Glycine max GmaAffx.93176.1.S1_s_at CF808901 expansin - 2e-24 At2g28950 ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6) C.G. S.X.
0.25 9e-19 93 Hordeum vulgare HVSMEl0024B06r2_at HVSMEl0024B06r2 - - 4e-6 At4g01630 ATEXPA17 (ARABIDOPSIS THALIANA EXPANSIN A17) C.G. S.X.
0.06 4e-2 40 Populus trichocarpa PtpAffx.213722.1.S1_at pmrna26778 hypothetical protein - 1e-19 At1g69530 ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1) C.G. S.X.
0.25 5e-22 105 Triticum aestivum Ta.5567.1.S1_at AY543529.1 expansin EXPA3 - 3e-18 At2g37640 EXP3 C.G. S.X.
0.08 2e-9 61 Vitis vinifera 1608191_at CD798831 hypothetical protein LOC100245911 - 4e-20 At2g39700 ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4) C.G. S.X.
0.29 2e-25 115 Zea mays Zm.667.1.A1_at AF332171.1 alpha-expansin 3 - 1e-7 At1g20190 ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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