CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0267200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.57 77.0 Os02g0267200 9630.m01561 - Alpha-expansin OsEXPA13 2e-6 At1g20190 ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11) S.X. H.G.
0.36 44.0 Os03g0802600 9631.m05785 - AAA ATPase, central region domain containingprotein 1e-2 At5g17760 AAA-type ATPase family protein S.X. H.G.
0.29 31.1 Os01g0588400 AK107346.1 - Band 7 protein family protein 9e-3 At1g75550 glycine-rich protein S.X. H.G.
0.11 6.5 Os01g0816600 NM_191078.1 - Protein kinase domain containing protein 3e-7 At5g49780 ATP binding / kinase/ protein serine/threonine kinase S.X. H.G.
0.11 6.5 Os11g0435300 9639.m02194 - - 1e+0 At2g36817 S.X. H.G.
0.07 3.7 Os02g0771400 9630.m05250 - Putative tyrosine phosphatase family protein 7e-2 At2g32960 tyrosine specific protein phosphatase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
27.0 99.6 GSM100443 Rice Bala 0ppm Arsenate (Control) Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
20.0 99.1 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.7 99.0 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.5 99.0 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.3 98.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
15.5 98.7 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.0 98.6 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.4 98.5 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.0 98.2 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.7 98.1 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.69 2e-103 377 Os02g0268050 9630.m01571 - - 1e-1 At2g40610 ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8) C.G. S.X.
0.53 4e-129 462 Os02g0268600 9630.m01572 - Expansin family protein 4e-4 At2g39700 ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4) C.G. S.X.
0.50 6e-128 458 Os02g0267700 9630.m01566 - Alpha-expansin OsEXPA14 3e-5 At4g01630 ATEXPA17 (ARABIDOPSIS THALIANA EXPANSIN A17) C.G. S.X.
0.39 9e-53 208 Os10g0439200 9638.m02604 - Alpha-expansin OsEXPA25 1e-4 At2g37640 EXP3 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 2e-6 54 Arabidopsis thaliana At1g20190 838608 ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) - - - C.G. S.X.
0.10 6e-4 46 Glycine max GmaAffx.93176.1.S1_s_at CF808901 expansin - 2e-24 At2g28950 ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6) C.G. S.X.
0.34 1e-36 153 Hordeum vulgare Contig3675_at Contig3675 - - 2e-10 At3g55500 ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16) C.G. S.X.
0.06 4e-5 50 Populus trichocarpa PtpAffx.24775.2.A1_x_at CV272777 hypothetical protein - 1e-41 At2g39700 ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4) C.G. S.X.
0.42 3e-88 325 Triticum aestivum Ta.8616.1.A1_at BQ162131 - - 4e+0 At3g56190 ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) C.G. S.X.
0.08 2e-9 61 Vitis vinifera 1608191_at CD798831 hypothetical protein LOC100245911 - 4e-20 At2g39700 ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4) C.G. S.X.
0.33 2e-50 198 Zea mays Zm.667.1.A1_at AF332171.1 alpha-expansin 3 - 1e-7 At1g20190 ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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