Gene omics information

Query gene ID Os02g0259600
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8295.0Os02g0259600AK062182.1-50S ribosomal protein L21, chloroplast precursor(CL21) (CS-L7)2e-3At1g3568050S ribosomal protein L21, chloroplast / CL21 (RPL21)S.X.H.G.
0.9299.1Os03g0452300AK065820.1-30S ribosomal protein S52e-4At2g33800ribosomal protein S5 family proteinS.X.H.G.
0.9299.1Os03g0122200AB042934.1-50S ribosomal protein L113e-2At1g32990PRPL11 (PLASTID RIBOSOMAL PROTEIN L11)S.X.H.G.
0.9299.1Os03g0704000CR281175-30S ribosomal protein S13, chloroplast precursor(CS13)1e-1At5g1432030S ribosomal protein S13, chloroplast (CS13)S.X.H.G.
0.9097.1Os03g0828100AK059132.1-50S ribosomal protein L181e-13At1g48350ribosomal protein L18 family proteinS.X.H.G.
0.9097.1Os03g0356300AK061469.1-Ribosomal protein L6 family protein4e-17At1g05190emb2394 (embryo defective 2394)S.X.H.G.
0.9097.1Os03g0769100AB022675.1-9S ribosomal protein5e-1At1g74970RPS9 (RIBOSOMAL PROTEIN S9)S.X.H.G.
0.9097.1Os03g0284400AF095709.1-Ribosomal protein L10-like2e+0At5g43150unknown proteinS.X.H.G.
0.8996.9Os02g0137200AK060290.1-50S ribosomal protein L3-1, chloroplast precursor2e-6At2g43030ribosomal protein L3 family proteinS.X.H.G.
0.8996.9Os02g0754300AK068621.1--9e-1At4g10465metal ion bindingS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.297.1GSM421718MOCK, 8 hai - rep4GSE16793Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.097.0GSM431936Shoot- -Fe+P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
5.796.9GSM431935Shoot- -Fe+P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
5.696.9GSM387562Wild-type, biological rep. 1GSE15448Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
4.896.5GSM421695XOO, 8 hai - rep1GSE16793Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
4.796.4GSM387556Transgenic line 4, biological rep. 1GSE15448Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
4.696.3GSM421674XOC, 4 hai - rep4GSE16793Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
4.596.3GSM302919leaf_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
4.596.3GSM387557Transgenic line 4, biological rep. 2GSE15448Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
4.496.2GSM387560Transgenic line 22, biological rep. 2GSE15448Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.047e-550Os01g02779009629.m01698-Heat shock protein DnaJ, N-terminal domaincontaining protein5e+0At1g10800unknown proteinC.G.S.X.
0.024e-344Os06g0150400AK067407.1-Saposin B domain containing protein2e-4At4g29520-C.G.S.X.
0.022e-242Os02g03048009630.m01928-Protein prenyltransferase domain containingprotein9e-1At1g71330ATNAP5C.G.S.X.
0.022e-242Os11g0130600AK066342.1--2e-4At1g18170immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.102e-344Arabidopsis thalianaAt1g3568084047250S ribosomal protein L21, chloroplast / CL21 (RPL21)F:structural constituent of ribosome, RNA binding;P:response to cold, translation;C:ribosome, chloroplast stroma, nucleus, chloroplast, chloroplast envelope;BOPMF---C.G.S.X.
0.044e-240Glycine maxPsAffx.CL2558Contig1_atPsAffx.CL2558Contig1--1e+1At5g04470SIM (SIAMESE)C.G.S.X.
0.502e-137488Hordeum vulgareContig3960_atContig3960--2e-3At1g3568050S ribosomal protein L21, chloroplast / CL21 (RPL21)C.G.S.X.
0.115e-550Populus trichocarpaPtpAffx.249.290.S1_atCV279684hypothetical protein-7e-3At1g3568050S ribosomal protein L21, chloroplast / CL21 (RPL21)C.G.S.X.
0.454e-128458Triticum aestivumTa.730.1.S1_atBJ287118--4e-2At1g3568050S ribosomal protein L21, chloroplast / CL21 (RPL21)C.G.S.X.
0.101e-136Vitis vinifera1613550_atCF519120hypothetical protein LOC100255002-1e-1At5g19240unknown proteinC.G.S.X.
0.415e-141500Zea maysZm.3982.1.A1_atAW14668450S ribosomal protein L21-2e-3At1g3568050S ribosomal protein L21, chloroplast / CL21 (RPL21)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006412The cellular metabolic process by which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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