Gene omics information

Query gene ID Os02g0258900
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5573.7Os02g0258900AK100565.1-Molybdopterin biosynthesis CNX2 protein(Molybdenum cofactor biosynthesis enzyme CNX2)2e-23At2g31955CNX2 (COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2)S.X.H.G.
0.4660.9Os07g0160300AK065685.1-Conserved hypothetical protein7e-1At1g32290unknown proteinS.X.H.G.
0.4458.1Os10g0516300CB620164-Electron transfer flavoprotein-ubiquinoneoxidoreductase, mitochondrial precursor (EC 1.5.5.1)(ETF-QO) (ETF-ubiquinone oxidoreductase) (ETFdehydrogenase) (Electron-transferring- flavoproteindehydrogenase). Splice isoform 28e-17At2g43400ETFQO (electron-transfer flavoprotein:ubiquinone oxidoreductase)S.X.H.G.
0.2727.5Os05g0125500CB660386-Isovaleryl-CoA dehydrogenase, mitochondrialprecursor (EC 1.3.99.10) (IVD)1e-26At3g45300IVD (ISOVALERYL-COA-DEHYDROGENASE)S.X.H.G.
0.127.2Os06g0153900AK101884.1-Thiol methyltransferase 24e-2At2g43910thiol methyltransferase, putativeS.X.H.G.
0.116.5Os08g0424200AK060716.1-Methylcrotonyl-CoA carboxylase beta chain,mitochondrial precursor (EC 6.4.1.4)(3-Methylcrotonyl-CoA carboxylase 2) (MCCase betasubunit) (3-methylcrotonyl-CoA:carbon dioxide ligase betasubunit)2e-26At4g34030MCCB (3-METHYLCROTONYL-COA CARBOXYLASE)S.X.H.G.
0.105.7Os09g0449600AK065937.1-Aconitase (EC 4.2.1.3)3e-5At2g05710aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.199.2GSM304653Mutant stable lineGSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
20.599.1GSM304669Control for the stable mutant rice line (1)GSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
18.198.9GSM304654Mutant stable line (1)GSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
15.598.7GSM304664Control for the stable mutant rice lineGSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
12.098.3GSM173091Rice OsSRT1 RNAi transgenic line LM1GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice
8.697.8GSM304397Control for the stable transgenic rice line (1)GSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
8.397.7GSM304395Control for the stable transgenic rice lineGSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
7.397.5GSM387562Wild-type, biological rep. 1GSE15448Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
6.997.3GSM431934Shoot- +Fe+P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
6.697.3GSM387558Transgenic line 4, biological rep. 3GSE15448Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8101935Os12g0507000AK065402.1-Molybdopterin synthase (CNX2)1e-33At2g31955CNX2 (COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2)C.G.S.X.
0.038e-654Os05g0498700AK065975.1-Gda-1 protein2e-11At3g27090-C.G.S.X.
0.031e-450Os01g0566900AK100223.1-3'-5' exonuclease domain containing protein5e-14At2g259103'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing proteinC.G.S.X.
0.035e-448Os01g0668000AK061159.1-Nuclear movement protein domain containing protein4e-11At5g58740nuclear movement family proteinC.G.S.X.
0.035e-448Os09g0326900AK067685.1--7e-36At1g36730eukaryotic translation initiation factor 5, putative / eIF-5, putativeC.G.S.X.
0.021e-450Os03g0326300AK066058.1-Zn-finger, RING domain containing protein6e-2At3g47980integral membrane HPP family proteinC.G.S.X.
0.022e-346Os04g0443700AK073841.1-Conserved hypothetical protein8e-1At5g66700HB53C.G.S.X.
0.011e-450Os01g0876400AK072910.1--4e-7At1g71360-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.282e-23111Arabidopsis thalianaAt2g31955817754CNX2 (COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2)COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli moaA. Expression is abundant in all tissues examined, particularly in roots. Appears to have targeting signals for chloroplast or mitochondria.---C.G.S.X.
0.124e-1377Glycine maxGmaAffx.79966.1.S1_atCA800909--8e-31At2g31955CNX2 (COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2)C.G.S.X.
0.091e-32141Hordeum vulgareContig22234_atContig22234--1e+1At5g07100WRKY26C.G.S.X.
0.173e-1791Populus trichocarpaPtpAffx.205004.1.S1_atpmrna9902hypothetical protein-4e-85At2g31955CNX2 (COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2)C.G.S.X.
0.540805Triticum aestivumTa.8717.3.S1_atCA640811--3e-21At2g31955CNX2 (COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2)C.G.S.X.
0.013e-136Vitis vinifera1615135_atCD797887--1e+1At5g41992CPuORF58 (Conserved peptide upstream open reading frame 58)C.G.S.X.
0.325e-130464Zea maysZm.4345.1.A1_atAW091099hypothetical protein LOC100272516-2e-19At2g31955CNX2 (COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006777The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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