CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0253700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.96 99.7 Os02g0253700 AK072542.1 - Conserved hypothetical protein 2e+0 At3g57950 unknown protein S.X. H.G.
0.58 77.0 Os11g0125100 9639.m00225 - - 1e-2 At5g42780 AtHB27 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 27) S.X. H.G.
0.58 77.0 Os02g0110100 9630.m00098 - - 5e-1 At4g34590 GBF6 (G-BOX BINDING FACTOR 6) S.X. H.G.
0.52 69.6 Os02g0294900 9630.m01835 - - 1e+0 At4g37830 cytochrome c oxidase-related S.X. H.G.
0.50 68.0 Os03g0560000 AK067185.1 - Hypothetical protein 2e+0 At4g22850 - S.X. H.G.
0.47 62.3 Os06g0325700 AK111131.1 - Conserved hypothetical protein 3e+0 At1g25470 AP2 domain-containing transcription factor, putative S.X. H.G.
0.46 60.9 Os06g0483000 9634.m02754 - - 6e+0 At4g14315 unknown protein S.X. H.G.
0.46 60.9 Os04g0640100 9632.m05320 - - 5e+0 At5g50200 WR3 (WOUND-RESPONSIVE 3) S.X. H.G.
0.45 58.8 Os01g0192400 NM_189681.1 - - 1e+0 At4g18335 unknown protein S.X. H.G.
0.43 55.4 Os11g0286401 9639.m01688 - - 2e-1 At1g23060 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
144.2 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
22.2 99.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.2 99.3 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.0 99.3 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.6 99.1 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
17.5 98.9 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.1 98.8 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.7 98.5 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.5 98.5 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.2 98.3 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 2e-26 121 Os02g0253800 AK100734.1 - Hypothetical protein 3e-1 At3g54680 proteophosphoglycan-related C.G. S.X.
0.06 1e-15 85 Os04g0168300 AK111111.1 - Hypothetical protein 4e-1 At4g10910 unknown protein C.G. S.X.
0.03 3e-6 54 Os05g0238400 AK073471.1 - Conserved hypothetical protein 4e-2 At2g30560 glycine-rich protein C.G. S.X.
0.02 1e-2 42 Os07g0201500 AK061074.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 4e+0 At4g30460 glycine-rich protein C.G. S.X.
0.02 5e-2 40 Os08g0166500 AK103907.1 - Hypothetical protein 5e-2 At3g09735 DNA-binding S1FA family protein C.G. S.X.
0.02 4e+0 34 Os01g0104900 BI806047 - Transferase family protein 4e+0 At4g00180 YAB3 (YABBY3) C.G. S.X.
0.01 3e-1 38 Os01g0578800 AK111466.1 - Conserved hypothetical protein 3e+0 At5g45860 Bet v I allergen family protein C.G. S.X.
0.01 4e+0 34 Os02g0773400 AK100497.1 - Ion transport protein family protein 4e-10 At3g17700 CNBT1 (CYCLIC NUCLEOTIDE-BINDING TRANSPORTER 1) C.G. S.X.
0.01 4e+0 34 Os08g0109400 AK068232.1 - AUX/IAA protein family protein 4e-1 At3g23050 IAA7 (INDOLE-3-ACETIC ACID 7) C.G. S.X.
0.01 4e+0 34 Os11g0605500 CB680661 - Acyl-CoA oxidase 2e-20 At5g65110 ACX2 (ACYL-COA OXIDASE 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At3g57950 824964 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P - - - C.G. S.X.
0.03 5e-2 40 Glycine max GmaAffx.75740.1.S1_at BG157373 - - 4e-1 At2g32100 OFP16 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16) C.G. S.X.
0.02 4e+0 32 Hordeum vulgare HVSMEg0015I15r2_at HVSMEg0015I15r2 - - 1e-6 At3g48890 ATMP2 C.G. S.X.
0.02 3e+0 34 Populus trichocarpa PtpAffx.125939.1.A1_at BP930767 hypothetical protein - 3e-1 At3g13340 WD-40 repeat family protein C.G. S.X.
0.03 6e-1 36 Triticum aestivum TaAffx.66667.1.S1_at BG907335 - - 1e+1 At4g37090 unknown protein C.G. S.X.
0.02 7e-1 34 Vitis vinifera 1617675_at CF373767 hypothetical protein LOC100245692 - 3e-13 At5g24020 MIND C.G. S.X.
0.02 4e+0 32 Zea mays ZmAffx.624.1.A1_at AI715052 - - 1e+1 At4g26160 ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0015986 The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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