Gene omics information

Query gene ID Os02g0252400
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7591.9Os02g0252400AB028131.1-Zn-finger, Dof type domain containing protein5e-5At1g47655Dof-type zinc finger domain-containing proteinS.X.H.G.
0.9299.1Os02g0214500AK107283.1-No apical meristem (NAM) protein domain containingprotein6e-4At2g18060VND1 (VASCULAR RELATED NAC-DOMAIN PROTEIN 1)S.X.H.G.
0.8094.6Os05g0415400AK107330.1-No apical meristem (NAM) protein domain containingprotein1e-2At3g15500ANAC055 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55)S.X.H.G.
0.7793.1Os07g0615500BI802838-Protein of unknown function DUF581 family protein1e-1At1g43900protein phosphatase 2C, putative / PP2C, putativeS.X.H.G.
0.7793.1Os01g0633100AY028314.1-ADP-glucose pyrophosphorylase large subunit(Fragment)1e-3At2g21590APL4S.X.H.G.
0.7591.9Os03g0168500CA765372-Thioredoxin-related domain containing protein2e+1At5g06510NF-YA10 (NUCLEAR FACTOR Y, SUBUNIT A10)S.X.H.G.
0.7591.9Os11g0512000AK107369.1--1e-2At3g51880HMGB1 (HIGH MOBILITY GROUP B 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
47.299.9GSM195229EndospermGSE7951Genome-wide gene expression profiling of rice stigma
39.199.9GSM302917endo6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
31.199.7GSM159214Seed (S3, 5 - 10 dap), biological rep 2GSE6893Expression data for reproductive development in rice
30.399.7GSM302916endo6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
26.399.5GSM159215Seed (S3, 5 - 10 dap), biological rep 3GSE6893Expression data for reproductive development in rice
25.799.5GSM1952305d-seedGSE7951Genome-wide gene expression profiling of rice stigma
25.099.5GSM240996Zhonghua11 7 DAF, biological replicate 3GSE9498Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
24.899.5GSM159217Seed (S4, 11 - 20 dap), biological rep 2GSE6893Expression data for reproductive development in rice
22.599.3GSM159220Seed (S5, 21 - 29 dap), biological rep 2GSE6893Expression data for reproductive development in rice
22.599.3GSM240995Zhonghua11 7 DAF, biological replicate 2GSE9498Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.116e-28127Os02g0673700AB028130.1-Zn finger protein (Fragment)1e-14At2g37590Dof-type zinc finger domain-containing proteinC.G.S.X.
0.109e-30133Os04g0567800AB028129.1-Dof zinc finger protein9e-17At2g37590Dof-type zinc finger domain-containing proteinC.G.S.X.
0.105e-22107Os03g0619100AK119803.1-DNA binding protein1e-7At4g38000Dof-type zinc finger domain-containing proteinC.G.S.X.
0.093e-23111Os01g0865800AU066081-AOBP (Ascorbate oxidase promoter-binding protein)2e-15At3g52440Dof-type zinc finger domain-containing proteinC.G.S.X.
0.093e-23111Os05g04400009633.m03401-Zn-finger, Dof type domain containing protein1e-13At3g52440Dof-type zinc finger domain-containing proteinC.G.S.X.
0.081e-28129Os02g0707200AF542507.1-The start codon is not identified.3e-15At2g37590Dof-type zinc finger domain-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-550Arabidopsis thalianaAt1g47655841175Dof-type zinc finger domain-containing proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;PO---C.G.S.X.
0.085e-963Glycine maxGmaAffx.26511.2.S1_atAI441766Dof4-4e-13At5g60850OBP4C.G.S.X.
0.102e-21103Hordeum vulgareContig13717_atContig13717--8e-22At2g37590Dof-type zinc finger domain-containing proteinC.G.S.X.
0.033e-757Populus trichocarpaPtpAffx.221506.1.S1_atpmrna38424f-box family protein-9e-14At3g45610Dof-type zinc finger domain-containing proteinC.G.S.X.
0.106e-1479Triticum aestivumTaAffx.116069.1.S1_atCA702374--3e-7At4g38000Dof-type zinc finger domain-containing proteinC.G.S.X.
0.021e-344Vitis vinifera1615083_atCB914242--1e-38At4g24060Dof-type zinc finger domain-containing proteinC.G.S.X.
0.103e-2099Zea maysZm.94.1.A1_atX79934.1Dof2-1e-7At2g28810Dof-type zinc finger domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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