CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0251900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 81.2 Os02g0251900 AK109286.1 - VQ domain containing protein 4e-1 At3g10830 unknown protein S.X. H.G.
0.22 19.4 Os02g0539200 AK108494.1 - U box domain containing protein 9e-4 At2g48120 PAC (PALE CRESS) S.X. H.G.
0.17 12.6 Os01g0127700 AK072972.1 - Protein kinase domain containing protein 1e-1 At1g09176 unknown protein S.X. H.G.
0.13 8.2 Os04g0571600 AK109680.1 - Multi antimicrobial extrusion protein MatE familyprotein 1e+1 Atcg00640 - S.X. H.G.
0.11 6.5 Os05g0530400 AY344492.1 - Heat shock factor protein 1 (HSF 1) (Heat shocktranscription factor 1) (HSTF 1) 1e-9 At5g03720 AT-HSFA3 S.X. H.G.
0.01 0.5 Os11g0629600 AK105472.1 - BTB/POZ domain containing protein 2e+0 At5g60620 phospholipid/glycerol acyltransferase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
63.8 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
50.9 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
23.9 99.4 GSM431934 Shoot- +Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
20.2 99.1 GSM431933 Shoot- +Fe+P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
16.9 98.8 GSM159180 Mature leaf, biological rep 1 GSE6893 Expression data for reproductive development in rice
13.8 98.5 GSM159184 Y Leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
11.5 98.2 GSM278852 KT95-418-RSV infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
7.3 97.5 GSM154947 Leaf_DMSO-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
7.1 97.4 GSM154945 Leaf_DMSO-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
6.4 97.2 GSM154946 Leaf_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-2 42 Os05g0130500 AK121598.1 - Hypothetical protein 4e-2 At3g02910 - C.G. S.X.
0.02 1e-2 42 Os02g0648300 AK111742.1 - Myb, DNA-binding domain containing protein 1e-9 At1g76890 - C.G. S.X.
0.02 5e-2 40 Os02g0186900 9630.m00853 - Cytochrome P450 family protein 8e-1 At4g37410 CYP81F4 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-1 36 Arabidopsis thaliana At3g10830 820252 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.03 1e-1 38 Glycine max GmaAffx.58553.2.A1_at BE822612 - - 2e-1 At1g43320 unknown protein C.G. S.X.
0.07 2e-16 85 Hordeum vulgare Contig15374_at Contig15374 - - 5e-1 At3g24260 - C.G. S.X.
0.04 5e-1 36 Populus trichocarpa PtpAffx.212534.1.S1_at pmrna24549 hypothetical protein - 5e-2 At2g41410 calmodulin, putative C.G. S.X.
0.04 2e+0 34 Triticum aestivum TaAffx.57536.1.S1_at CA627341 - - 2e-1 At2g36100 integral membrane family protein C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1614422_at CD799296 hypothetical protein LOC100245605 - 1e-15 At1g31170 SRX (SULFIREDOXIN) C.G. S.X.
0.03 7e-1 34 Zea mays ZmAffx.259.1.S1_s_at AI668215 Glycine-rich protein - 9e-1 At5g40970 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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