CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0240100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.6 Os02g0240100 AK108037.1 - Peroxidase (EC 1.11.1.7) 7e-4 At5g05340 peroxidase, putative S.X. H.G.
0.60 79.7 Os12g0518200 AK070844.1 - Protein of unknown function DUF6 domain containingprotein 3e+0 At4g26290 unknown protein S.X. H.G.
0.50 68.0 Os01g0160800 AB051108.1 - Protein synthesis inhibitor II (EC 3.2.2.22)(Ribosome-inactivating protein II) (rRNA N-glycosidase) 7e-1 At2g43570 chitinase, putative S.X. H.G.
0.50 68.0 Os01g0963000 AK109480.1 - Peroxidase BP 1 precursor 6e-1 At5g40150 peroxidase, putative S.X. H.G.
0.40 51.1 Os04g0618700 AK120799.1 - Protein kinase domain containing protein 2e+0 At3g56210 binding S.X. H.G.
0.03 1.4 Os11g0212900 AK111542.1 - Hypothetical protein 4e-4 At5g55630 ATKCO1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
33.6 99.8 GSM421689 XOO, 2 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
29.7 99.7 GSM421709 MOCK, 2 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
29.0 99.7 GSM375648 Taichung 65_shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
26.5 99.5 GSM375647 Taichung 65_shoot_replicate 1 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
26.4 99.5 GSM375649 Taichung 65_shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
21.8 99.2 GSM421670 XOC, 2 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
18.3 98.9 GSM421667 XOC, 2 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
17.1 98.8 GSM431937 Shoot- +Fe-P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
15.8 98.7 GSM421668 XOC, 2 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
15.1 98.6 GSM421688 XOO, 2 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.53 3e-162 573 Os02g0240300 AK067000.1 - Plant peroxidase family protein 1e-2 At5g05340 peroxidase, putative C.G. S.X.
0.25 7e-27 123 Os06g0547400 AK121950.1 - Peroxidase P7 (EC 1.11.1.7) (TP7) 2e-4 At5g05340 peroxidase, putative C.G. S.X.
0.23 3e-17 91 Os02g0236800 AK099886.1 - Peroxidase P7 (EC 1.11.1.7) (TP7) 4e-2 At5g40150 peroxidase, putative C.G. S.X.
0.18 2e-24 115 Os06g0546950 9634.m03354 - - 1e-5 At5g05340 peroxidase, putative C.G. S.X.
0.10 1e-19 99 Os07g0638600 9635.m04465 - Peroxidase 1 6e-10 At5g40150 peroxidase, putative C.G. S.X.
0.08 3e-17 91 Os01g0962700 BU673129 - Peroxidase 12 precursor (EC 1.11.1.7) (AtperoxP12) (PRXR6) (ATP4a) 5e-2 At1g71695 peroxidase 12 (PER12) (P12) (PRXR6) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 7e-4 46 Arabidopsis thaliana At5g05340 830416 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:apoplast, cell wall;PFOBM - - - C.G. S.X.
0.04 6e-2 40 Glycine max GmaAffx.18180.1.S1_at BQ080718 - - 1e-1 At5g58400 peroxidase, putative C.G. S.X.
0.54 2e-61 236 Hordeum vulgare Contig3243_x_at Contig3243 - - 6e-4 At1g44970 peroxidase, putative C.G. S.X.
0.03 6e-2 40 Populus trichocarpa PtpAffx.55376.1.S1_at AY953377.1 hypothetical protein - 6e-1 At5g58390 peroxidase, putative C.G. S.X.
0.38 2e-44 180 Triticum aestivum TaAffx.131397.1.S1_x_at CA632092 - - 9e-2 At2g41480 electron carrier/ heme binding / peroxidase C.G. S.X.
0.02 5e-5 48 Vitis vinifera 1609321_at CA817974 hypothetical protein LOC100241916 - 7e-7 At1g71695 peroxidase 12 (PER12) (P12) (PRXR6) C.G. S.X.
0.15 3e-16 85 Zea mays Zm.10660.1.A1_at CF634854 Plasma membrane-bound peroxidase 2b - 8e-3 At5g05340 peroxidase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006979 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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