CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0208600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.94 99.4 Os02g0208600 AK105113.1 - The stop codon is not identified. 2e-15 At3g25840 protein kinase family protein S.X. H.G.
0.38 46.9 Os04g0349600 AK070947.1 - TPR-like domain containing protein 2e-2 At3g19160 ATIPT8 (ATP/ADP ISOPENTENYLTRANSFERASES) S.X. H.G.
0.33 38.8 Os01g0104600 AK100613.1 - Light-mediated development protein DET1(Deetiolated1) 7e-5 At4g10180 DET1 (DE-ETIOLATED 1) S.X. H.G.
0.29 31.1 Os08g0215200 AK072536.1 - En/Spm-like transposon proteins family protein 1e-1 At1g10950 endomembrane protein 70, putative S.X. H.G.
0.29 31.1 Os04g0677800 AK102572.1 - Protein synthesis factor, GTP-binding domaincontaining protein 1e-25 At5g10630 elongation factor 1-alpha, putative / EF-1-alpha, putative S.X. H.G.
0.26 25.6 Os05g0194000 AK107561.1 - Hypothetical protein 1e+0 At3g29300 unknown protein S.X. H.G.
0.25 24.1 Os02g0320100 AK103173.1 - SAM (and some other nucleotide) binding motifdomain containing protein 7e-5 At5g66180 - S.X. H.G.
0.25 24.1 Os01g0958400 AK121241.1 - Protein of unknown function UPF0044 family protein 2e-2 At5g44280 RING1A (RING 1A) S.X. H.G.
0.24 22.4 Os01g0680700 AK120014.1 - Conserved hypothetical protein 8e-2 At4g21720 unknown protein S.X. H.G.
0.22 19.4 Os11g0704300 AK105431.1 - GTP1/OBG subdomain containing protein 7e-8 At1g07615 GTP binding S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
37.0 99.8 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
28.4 99.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.4 99.6 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.4 99.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.7 98.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.6 98.4 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.8 98.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.8 98.3 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.8 98.1 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.9 98.0 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.35 0 1443 Os12g0640800 AK060641.1 - Serine/threonine-protein kinase PRP4 homolog (EC2.7.1.37) (PRP4 pre- mRNA processing factor 4 homolog)(Pre-mRNA protein kinase) 6e-22 At3g25840 protein kinase family protein C.G. S.X.
0.20 1e-46 190 Os06g0595900 AK066655.1 - The start codon is not identified. 3e-2 At5g11430 zinc ion binding C.G. S.X.
0.13 1e-43 180 Os03g0710100 AK069094.1 - Protein kinase domain containing protein 2e-3 At1g13330 - C.G. S.X.
0.01 4e-3 46 Os02g0209100 AK105040.1 - Coatomer WD associated region domain containingprotein 5e-9 At1g52360 coatomer protein complex, subunit beta 2 (beta prime), putative C.G. S.X.
0.01 4e-3 46 Os04g0137100 AK060609.1 - Pectate lyase (Fragment) 8e-6 At3g07010 pectate lyase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 2e-15 85 Arabidopsis thaliana At3g25840 822178 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:nucleus;MOFPBVA - - - C.G. S.X.
0.09 2e-7 59 Glycine max GmaAffx.61837.1.S1_at BU762817 - - 2e-11 At3g25840 protein kinase family protein C.G. S.X.
0.10 7e-20 99 Hordeum vulgare HD11F21r_at HD11F21r - - 9e-1 At2g29452 unknown protein C.G. S.X.
0.10 6e-32 141 Populus trichocarpa PtpAffx.30246.1.A1_at CV267148 hypothetical protein - 5e-32 At3g25840 protein kinase family protein C.G. S.X.
0.01 5e-7 57 Triticum aestivum Ta.21418.1.S1_x_at BJ253729 - - 4e-8 At2g37110 unknown protein C.G. S.X.
0.01 1e-1 38 Vitis vinifera 1611816_at CF514126 hypothetical protein LOC100264483 - 1e+0 At1g65390 ATPP2-A5 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2 A5) C.G. S.X.
0.23 4e-160 565 Zea mays Zm.16814.1.A1_at CK368508 - - 2e-14 At3g25840 protein kinase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006350 The synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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