CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0207100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os02g0207100 AK119766.1 - BCH1 1e+0 At2g11005 glycine-rich protein S.X. H.G.
0.60 79.7 Os10g0153800 NM_194912.1 - - 2e-1 At2g02440 unknown protein S.X. H.G.
0.57 77.0 Os01g0889101 NM_190210.1 - - 1e-3 At3g17160 unknown protein S.X. H.G.
0.57 77.0 Os11g0215200 9639.m01036 - - 5e-2 At4g19270 unknown protein S.X. H.G.
0.38 46.9 Os06g0110600 NM_185383.1 - - 4e-1 At5g38300 unknown protein S.X. H.G.
0.17 12.6 Os10g0392050 9638.m02132 - - 4e+0 At3g22110 PAC1 S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
48.2 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
31.9 99.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.7 99.7 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.4 99.5 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.3 99.5 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.9 99.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.1 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.6 99.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.9 99.4 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.5 99.2 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.57 0 876 Os02g0207400 9630.m01045 - - 2e-1 At4g34135 UGT73B2 (UDP-GLUCOSYLTRANSFERASE 73B2) C.G. S.X.
0.31 5e-41 171 Os02g0206100 AK066593.1 - The start codon is not identified. 4e+0 At3g60550 CYCP3 C.G. S.X.
0.16 6e-127 456 Os02g0112600 AK109733.1 - Membrane transporter 2e-8 At1g08090 ATNRT2:1 (NITRATE TRANSPORTER 2:1) C.G. S.X.
0.15 9e-129 462 Os02g0112100 AB008519.1 - BCH2 2e-8 At1g08090 ATNRT2:1 (NITRATE TRANSPORTER 2:1) C.G. S.X.
0.07 2e-22 109 Os01g0230800 NM_188614.1 - Hypothetical protein 2e+0 At2g19070 SHT (SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE) C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+0 36 Arabidopsis thaliana At2g11005 815567 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MBOPFVA - - - C.G. S.X.
0.02 9e-2 40 Glycine max PsAffx.psMA002xO11f_s_at PsAffx.psMA002xO11f - - 5e+0 At5g10430 AGP4 (ARABINOGALACTAN PROTEIN 4) C.G. S.X.
0.12 4e-23 109 Hordeum vulgare Contig26512_at Contig26512 - - 2e-13 At1g08090 ATNRT2:1 (NITRATE TRANSPORTER 2:1) C.G. S.X.
0.02 1e+0 36 Populus trichocarpa PtpAffx.208589.1.S1_at pmrna17046 hypothetical protein - 3e-1 At5g65640 bHLH093 (beta HLH protein 93) C.G. S.X.
0.09 4e-3 44 Triticum aestivum TaAffx.12159.1.S1_at BJ286382 - - 8e-2 At5g17050 UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2) C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1618277_at CF568829 hypothetical protein LOC100265689 - 3e-48 At1g79530 GAPCP-1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1) C.G. S.X.
0.15 8e-86 317 Zea mays Zm.10344.1.S1_at AY129953.1 nrt2.1 protein - 2e-4 At1g08090 ATNRT2:1 (NITRATE TRANSPORTER 2:1) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage