CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0202900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.98 100.0 Os02g0202900 9630.m01008 - Cyclin-like F-box domain containing protein 2e-1 At3g44950 glycine-rich protein S.X. H.G.
0.52 69.6 Os10g0378450 9638.m01977 - - 5e+0 At4g39260 GR-RBP8 S.X. H.G.
0.50 68.0 Os02g0242400 9630.m01356 - - 6e+0 At5g55570 unknown protein S.X. H.G.
0.46 60.9 Os01g0668900 AK110235.1 - Conserved hypothetical protein 5e-1 At4g13160 unknown protein S.X. H.G.
0.46 60.9 Os03g0382000 9631.m02605 - - 1e+0 At4g19270 unknown protein S.X. H.G.
0.44 58.1 Os03g0661200 9631.m04448 - - 9e-1 At3g03150 unknown protein S.X. H.G.
0.38 46.9 Os10g0101500 NM_194481.1 - - 3e+0 At5g63480 unknown protein S.X. H.G.
0.36 44.0 Os07g0566100 NM_186349.1 - - 3e+0 At5g43401 - S.X. H.G.
0.34 40.0 Os10g0318100 NM_195619.1 - - 1e+1 At5g62330 - S.X. H.G.
0.33 38.8 Os06g0645600 9634.m04231 - Conserved hypothetical protein 3e+0 At1g56530 hydroxyproline-rich glycoprotein family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
42.1 99.9 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
40.5 99.9 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
39.7 99.9 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
37.4 99.8 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
35.8 99.8 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
33.4 99.8 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.7 99.7 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.7 99.7 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.6 99.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.5 99.1 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e-3 44 Os04g0419100 AK107777.1 - Hypothetical protein 8e-3 At5g23680 sterile alpha motif (SAM) domain-containing protein C.G. S.X.
0.03 1e-3 46 Os08g0500000 AK058215.1 - COP9 complex subunit 6 6e-23 At4g26430 CSN6B C.G. S.X.
0.02 1e-3 46 Os09g0272000 AK068208.1 - Heavy metal transport/detoxification proteindomain containing protein 1e-1 At5g57290 60S acidic ribosomal protein P3 (RPP3B) C.G. S.X.
0.02 5e-3 44 Os04g0419000 9632.m03282 - - 1e-2 At5g23680 sterile alpha motif (SAM) domain-containing protein C.G. S.X.
0.02 5e-3 44 Os04g0475200 9632.m03792 - - 1e-1 At3g44950 glycine-rich protein C.G. S.X.
0.02 5e-3 44 Os07g0673700 AK071934.1 - Cyclin-like F-box domain containing protein 4e+0 At3g43583 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-1 38 Arabidopsis thaliana At3g44950 823630 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOPFVA - - - C.G. S.X.
0.03 6e-2 40 Glycine max PsAffx.C93000030_at PsAffx.C93000030 - - 3e+0 At5g51840 unknown protein C.G. S.X.
0.03 8e-2 38 Hordeum vulgare Contig3378_at Contig3378 - - 2e+0 At5g67500 VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2) C.G. S.X.
0.02 2e-1 38 Populus trichocarpa Ptp.5087.1.S1_s_at CF231827 hypothetical protein - 9e-8 At3g07480 electron carrier/ iron-sulfur cluster binding C.G. S.X.
0.10 3e-6 54 Triticum aestivum TaAffx.25112.1.S1_at CA706261 - - 1e+1 At5g37290 armadillo/beta-catenin repeat family protein C.G. S.X.
0.03 1e-2 40 Vitis vinifera 1616431_at CF605090 - - 7e-2 At3g57500 unknown protein C.G. S.X.
0.03 5e-3 42 Zea mays Zm.15348.1.A1_x_at CF637051 proline oxidase - 6e-1 At2g20619 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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