CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0201000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os02g0201000 AK064792.1 - Conserved hypothetical protein 7e-2 At5g25360 unknown protein S.X. H.G.
0.73 91.1 Os04g0455800 AK120652.1 - Lipoic acid synthetase, mitochondrial precursor(Lip-syn) (Lipoate synthase) (mLIP1) 6e-51 At2g20860 LIP1 (LIPOIC ACID SYNTHASE 1) S.X. H.G.
0.50 68.0 Os02g0106800 AK060675.1 - Conserved hypothetical protein 3e-6 At4g10430 - S.X. H.G.
0.46 60.9 Os04g0685800 BU673488 - Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase(EC 3.6.1.17) 1e-8 At5g06340 ATNUDX27 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 27) S.X. H.G.
0.44 58.1 Os03g0454100 AK067011.1 - TMS membrane protein/tumour differentiallyexpressed protein family protein 1e-11 At1g16180 TMS membrane family protein / tumour differentially expressed (TDE) family protein S.X. H.G.
0.23 21.2 Os02g0805600 AK099516.1 - Quinone oxidoreductase 2e-1 At4g21580 oxidoreductase, zinc-binding dehydrogenase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.4 96.2 GSM207565 Mudanjiang8 wild type control rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
4.0 95.9 GSM302918 leaf_rep1 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
4.0 95.9 GSM302919 leaf_rep2 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
3.6 95.5 GSM207566 Mudanjiang8 wild type control rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
3.6 95.5 GSM207560 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
3.5 95.3 GSM207567 Mudanjiang8 wild type control rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
3.5 95.3 GSM431939 Shoot- -Fe-P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
3.4 95.2 GSM302923 seedling_rep2 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
3.3 95.1 GSM207563 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
3.2 94.9 GSM207559 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e-7 57 Os05g0296700 AK063686.1 - Hypothetical protein 1e+0 At1g60470 AtGolS4 (Arabidopsis thaliana galactinol synthase 4) C.G. S.X.
0.02 6e-4 48 Os02g0686400 AK119608.1 - Aspartyl-tRNA synthetase (EC 6.1.1.12)(Aspartate--tRNA ligase) (AspRS) 1e-6 At4g31180 aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase, putative C.G. S.X.
0.02 6e-4 48 Os12g0596900 AK100450.1 - Hypothetical protein 2e-1 At5g64920 CIP8 (COP1-INTERACTING PROTEIN 8) C.G. S.X.
0.02 2e-3 46 Os06g0542300 9634.m03314 - Heavy metal transport/detoxification proteindomain containing protein 3e-2 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.01 6e-4 48 Os01g0915600 AK101063.1 - TA1 protein (Fragment) 2e-11 At3g07340 basic helix-loop-helix (bHLH) family protein C.G. S.X.
0.01 2e-3 46 Os06g0643700 BX928901 - Hly-III related proteins family protein 2e+0 At5g20270 HHP1 (HEPTAHELICAL TRANSMEMBRANE PROTEIN1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 7e-2 40 Arabidopsis thaliana At5g25360 832608 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO - - - C.G. S.X.
0.07 2e-3 46 Glycine max GmaAffx.91290.1.S1_at CF806951 hypothetical LOC547651 - 2e-2 At5g25360 unknown protein C.G. S.X.
0.31 4e-150 531 Hordeum vulgare Contig7961_at Contig7961 - - 7e-3 At1g15350 unknown protein C.G. S.X.
0.04 3e-2 42 Populus trichocarpa Ptp.4857.2.S1_s_at CK095641 hypothetical protein - 2e-9 At5g25360 unknown protein C.G. S.X.
0.29 7e-141 502 Triticum aestivum Ta.13181.1.S1_x_at CD898470 - - 1e-1 At5g03440 unknown protein C.G. S.X.
0.06 2e-2 40 Vitis vinifera 1617461_at CF609620 hypothetical protein LOC100245670 - 1e-1 At5g25360 unknown protein C.G. S.X.
0.28 1e-91 337 Zea mays Zm.7582.1.A1_at BM073867 hypothetical protein LOC100216795 - 2e+0 At5g03440 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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