CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0190500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os02g0190500 AK111710.1 - Leucine-rich repeat transmembrane protein kinase 2 2e-18 At4g22130 SRF8 (STRUBBELIG-RECEPTOR FAMILY 8) S.X. H.G.
0.46 60.9 Os12g0596600 AK064196.1 - Hypothetical protein 3e-4 At3g50780 - S.X. H.G.
0.44 58.1 Os01g0170500 AK106837.1 - Protein of unknown function DUF239 domaincontaining protein 3e-19 At5g50150 unknown protein S.X. H.G.
0.40 51.1 Os04g0685900 AK063635.1 - Receptor-like protein kinase-like protein(Fragment) 3e-2 At2g01820 leucine-rich repeat protein kinase, putative S.X. H.G.
0.33 38.8 Os10g0363700 BI803810 - Conserved hypothetical protein 4e+0 At4g14430 IBR10 (INDOLE-3-BUTYRIC ACID RESPONSE 10) S.X. H.G.
0.21 17.9 Os04g0412900 AK073418.1 - Sec23/Sec24 trunk region domain containing protein 2e-5 At2g27460 sec23/sec24 transport family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.1 97.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.6 97.5 GSM159187 SAM, biological rep 2 GSE6893 Expression data for reproductive development in rice
6.8 97.3 GSM429984 Rice wild-type panicle rep2 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
6.3 97.2 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.2 97.1 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.9 97.0 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.7 96.9 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.7 96.9 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.6 96.9 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.5 96.8 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.35 2e-106 389 Os06g0634500 AK111551.1 - Protein kinase domain containing protein 1e-13 At4g22130 SRF8 (STRUBBELIG-RECEPTOR FAMILY 8) C.G. S.X.
0.06 3e-12 75 Os03g0397700 AK111635.1 - Serine/threonine protein kinase-like protein(Strubbelig receptor family 7) 1e-3 At1g53730 SRF6 (STRUBBELIG-RECEPTOR FAMILY 6) C.G. S.X.
0.05 5e-8 61 Os10g0389800 NM_196278.1 - Protein kinase domain containing protein 2e-8 At3g14350 SRF7 (STRUBBELIG-RECEPTOR FAMILY 7) C.G. S.X.
0.01 8e-7 57 Os05g0135800 AK066258.1 - Pto kinase interactor 1 2e-66 At3g62220 serine/threonine protein kinase, putative C.G. S.X.
0.01 5e-5 52 Os10g0151100 9638.m00516 - Protein kinase domain containing protein 3e-4 At2g05940 protein kinase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 2e-18 95 Arabidopsis thaliana At4g22130 828302 SRF8 (STRUBBELIG-RECEPTOR FAMILY 8) F:in 6 functions;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA - - - C.G. S.X.
0.14 4e-17 91 Glycine max GmaAffx.36693.1.S1_at BG881453 - - 2e-70 At4g22130 SRF8 (STRUBBELIG-RECEPTOR FAMILY 8) C.G. S.X.
0.51 0 1088 Hordeum vulgare Contig6843_at Contig6843 - - 2e-32 At4g22130 SRF8 (STRUBBELIG-RECEPTOR FAMILY 8) C.G. S.X.
0.20 1e-54 216 Populus trichocarpa PtpAffx.209626.1.S1_at pmrna19021 hypothetical protein - 3e-113 At4g22130 SRF8 (STRUBBELIG-RECEPTOR FAMILY 8) C.G. S.X.
0.39 0 769 Triticum aestivum Ta.27027.1.S1_s_at CA596068 - - 9e-34 At4g22130 SRF8 (STRUBBELIG-RECEPTOR FAMILY 8) C.G. S.X.
0.12 6e-31 135 Vitis vinifera 1607816_at CF216068 hypothetical protein LOC100248686 - 1e-28 At4g22130 SRF8 (STRUBBELIG-RECEPTOR FAMILY 8) C.G. S.X.
0.08 2e-7 57 Zea mays Zm.11939.1.A1_at CF624620 - - 7e-21 At3g14350 SRF7 (STRUBBELIG-RECEPTOR FAMILY 7) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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