Gene omics information

Query gene ID Os02g0177600
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5068.0Os02g0177600AK070083.1-4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)(4-coumaroyl-CoA synthase 1)3e-7At3g212404CL2 (4-COUMARATE:COA LIGASE 2)S.X.H.G.
0.5573.7Os10g0479700AK109405.2-Conserved hypothetical protein6e-8At2g28315-S.X.H.G.
0.4051.1Os01g0214800AK065001.1-Lipolytic enzyme, G-D-S-L family protein5e-2At1g28590lipase, putativeS.X.H.G.
0.3134.5Os01g0878800AK070251.1-Extradiol ring-cleavage dioxygenase, class IIIenzyme, subunit B domain containing protein4e-2At5g41440zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.2625.6Os08g0441500AK102061.1-Cinnamoyl-CoA reductase2e+0At1g15950CCR1 (CINNAMOYL COA REDUCTASE 1)S.X.H.G.
0.1915.1Os12g0502800AK058620.1-Allantoin permease2e-20At2g03590ATUPS1 (ARABIDOPSIS THALIANA UREIDE PERMEASE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
32.099.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
18.599.0GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
11.998.3GSM262018Nipponbare, 11 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
11.098.2GSM262019Nipponbare, 11 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
9.097.8GSM262007IAC165, 11 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
7.897.6GSM262020Nipponbare, 11 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
6.897.3GSM262010Nipponbare, 2 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
6.597.2GSM262006IAC165, 11 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
6.497.2GSM262011Nipponbare, 2 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
6.297.1GSM262013Nipponbare, 2 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.630866Os06g0656500AK068985.1--2e-2At3g212404CL2 (4-COUMARATE:COA LIGASE 2)C.G.S.X.
0.245e-106387Os08g0245200AK069932.1-4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)(4-coumaroyl-CoA synthase 1)3e-10At3g212404CL2 (4-COUMARATE:COA LIGASE 2)C.G.S.X.
0.212e-77291Os02g0697400AK105636.1-4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2)(4-coumaroyl-CoA synthase 2)8e-5At1g650604CL3C.G.S.X.
0.212e-53212Os08g0448000AK120964.1-4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)(4-coumaroyl-CoA synthase 1) (Clone 4CL14) (Fragment)1e-6At3g212404CL2 (4-COUMARATE:COA LIGASE 2)C.G.S.X.
0.032e-240Os01g0186600AK108138.1-Conserved hypothetical protein2e+0At2g47370-C.G.S.X.
0.023e-136Os01g0324400AK102490.1-Hypothetical protein9e-1At2g44304unknown proteinC.G.S.X.
0.023e-136Os05g0415700AK102449.1-Glycoside hydrolase, family 20 protein6e-24At1g65590HEXO3 (BETA-HEXOSAMINIDASE 3)C.G.S.X.
0.021e+034Os01g0233000AK065256.1--4e-2At4g20260DREPP plasma membrane polypeptide family proteinC.G.S.X.
0.021e+034Os03g0764600AK105625.1--4e-9At1g68670myb family transcription factorC.G.S.X.
0.021e+034Os06g0234600AK063415.1-Protein of unknown function DUF231 domaincontaining protein3e+0At5g40180unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.063e-757Arabidopsis thalianaAt3g212408216784CL2 (4-COUMARATE:COA LIGASE 2)encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate.---C.G.S.X.
0.072e-552Glycine maxGma.8472.1.S1_atBI9420984-coumarate:Coenzyme A ligase isoenzyme 4-2e-8At1g516804CL1 (4-COUMARATE:COA LIGASE 1)C.G.S.X.
0.6401140Hordeum vulgareContig4676_atContig4676--6e-2At1g516804CL1 (4-COUMARATE:COA LIGASE 1)C.G.S.X.
0.084e-448Populus trichocarpaPtpAffx.12056.3.S1_a_atCV2594944-Coumarate:CoA ligase-5e-22At1g650604CL3C.G.S.X.
0.495e-154545Triticum aestivumTaAffx.30205.1.S1_x_atCA681671--3e+0At1g516804CL1 (4-COUMARATE:COA LIGASE 1)C.G.S.X.
0.122e-1169Vitis vinifera1609307_atCD715818hypothetical protein LOC100254698-3e-16At3g212404CL2 (4-COUMARATE:COA LIGASE 2)C.G.S.X.
0.6801536Zea maysZm.3406.1.S1_atAY566301.14-coumarate coenzyme A ligase-7e-2At1g516804CL1 (4-COUMARATE:COA LIGASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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