CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0165100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 95.8 Os02g0165100 AK066645.1 - Protein kinase domain containing protein 2e-4 At2g35620 FEI2 (FEI 2) S.X. H.G.
0.67 87.2 Os03g0302200 AK120853.1 - Zn-finger-like, PHD finger domain containingprotein 3e-14 At3g05670 PHD finger family protein S.X. H.G.
0.67 87.2 Os03g0285800 AF332873.1 - MAP kinase 1 (MAP kinase MAPK5a) 8e-4 At2g43790 ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6) S.X. H.G.
0.67 87.2 Os04g0619400 AK066337.1 - Protein kinase domain containing protein 9e-7 At1g16670 protein kinase family protein S.X. H.G.
0.60 79.7 Os07g0545800 AY062209.1 - Chitin-inducible gibberellin-responsive protein 7e-2 At5g48150 PAT1 (phytochrome a signal transduction 1) S.X. H.G.
0.40 51.1 Os10g0580900 AK072734.1 - Conserved hypothetical protein 5e-8 At4g25030 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
17.7 98.9 GSM159184 Y Leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
15.3 98.7 GSM159183 Y Leaf, biological rep 1 GSE6893 Expression data for reproductive development in rice
14.8 98.6 GSM154829 Root_DMSO-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
13.6 98.5 GSM154831 Root_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
13.6 98.5 GSM375765 gid1-3_ shoot_replicate 1 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
13.3 98.4 GSM375766 gid1-3_ shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
12.4 98.3 GSM375767 gid1-3_ shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
11.5 98.2 GSM154832 Root_DMSO-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
11.3 98.2 GSM159189 Young inflorescence (P1, upto 3 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
10.4 98.1 GSM159197 Inflorescence (P3, 5 - 10 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.29 5e-84 313 Os06g0676600 AK103523.1 - Protein kinase domain containing protein 4e-6 At3g09010 protein kinase family protein C.G. S.X.
0.22 0 1291 Os02g0165200 AK101881.1 - Conserved hypothetical protein 5e-1 At1g36960 unknown protein C.G. S.X.
0.09 8e-12 73 Os04g0619400 AK066337.1 - Protein kinase domain containing protein 9e-7 At1g16670 protein kinase family protein C.G. S.X.
0.06 2e-27 125 Os06g0676500 AK069470.1 - Conserved hypothetical protein 8e-5 At1g53430 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
0.02 2e-6 56 Os07g0130300 NM_186211.1 - Lectin-like receptor kinase 7;1 4e-3 At2g37710 RLK (receptor lectin kinase) C.G. S.X.
0.01 7e-6 54 Os07g0695300 AK072806.1 - Serine/threonine-protein kinase PBS1 (EC 2.7.1.37)(AvrPphB susceptible protein 1) 3e-22 At5g02800 protein kinase family protein C.G. S.X.
0.01 2e-3 46 Os01g0117300 9629.m00191 - Protein kinase domain containing protein 2e-1 At5g38280 PR5K C.G. S.X.
0.01 2e-3 46 Os01g0117500 9629.m00193 - LRK14 2e-1 At5g38280 PR5K C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-4 48 Arabidopsis thaliana At2g35620 818130 FEI2 (FEI 2) Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots. - - - C.G. S.X.
0.05 5e-3 44 Glycine max GmaAffx.86611.1.S1_at BI316735 - - 2e-34 At5g02800 protein kinase family protein C.G. S.X.
0.31 2e-80 299 Hordeum vulgare Contig17515_at Contig17515 - - 2e+0 At2g20120 COV1 (CONTINUOUS VASCULAR RING) C.G. S.X.
0.13 2e-5 52 Populus trichocarpa PtpAffx.224754.1.S1_at pmrna43579 hypothetical protein - 3e-2 At1g61480 S-locus protein kinase, putative C.G. S.X.
0.45 1e-101 371 Triticum aestivum Ta.3850.1.S1_at CD452378 - - 6e-4 At1g01540 protein kinase family protein C.G. S.X.
0.03 3e-1 36 Vitis vinifera 1613856_at CD012158 hypothetical protein LOC100264793 - 4e-89 At1g31420 FEI1 (FEI 1) C.G. S.X.
0.13 1e-38 161 Zea mays Zm.689.1.S1_at BM074684 serine/threonine-protein kinase receptor - 2e-6 At3g09010 protein kinase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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