CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0159400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 79.7 Os02g0159400 AK109550.1 - Hypothetical protein 8e-2 At3g46666 unknown protein S.X. H.G.
0.73 91.1 Os01g0818100 NM_191091.1 - - 2e-8 At5g01990 auxin efflux carrier family protein S.X. H.G.
0.73 91.1 Os02g0456000 AK119496.1 - - 4e-6 At4g01400 - S.X. H.G.
0.46 60.9 Os12g0626000 AK109499.1 - Hypothetical protein 9e-3 At3g13570 SCL30a S.X. H.G.
0.40 51.1 Os09g0413300 9637.m02118 - TPR-like domain containing protein 3e-1 At4g02750 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
0.34 40.0 Os07g0555300 AK071161.1 - Hypothetical protein 9e-2 At3g22840 ELIP1 (EARLY LIGHT-INDUCABLE PROTEIN) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
35.5 99.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
34.1 99.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
33.5 99.8 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.6 99.8 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.9 99.7 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.8 99.7 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.6 99.6 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.2 99.5 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.8 99.5 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.3 99.4 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-2 42 Os06g0221500 9634.m01156 - - 1e-1 At5g05280 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 2e-4 50 Os04g0128700 AK107172.1 - Conserved hypothetical protein 2e-1 At1g19950 HVA22H (HVA22-LIKE PROTEIN H (ATHVA22H)) C.G. S.X.
0.01 6e-4 48 Os01g0817000 AK072492.1 - Protein of unknown function DUF607 family protein 1e-2 At5g66815 unknown protein C.G. S.X.
0.01 1e-2 44 Os06g0136900 AK107405.1 - Protein of unknown function DUF296 domaincontaining protein 7e-4 At4g17800 DNA-binding protein-related C.G. S.X.
0.01 4e-2 42 Os08g0392300 9636.m03014 - Conserved hypothetical protein 2e+0 At1g78440 ATGA2OX1 (gibberellin 2-oxidase 1) C.G. S.X.
0.01 4e-2 42 Os12g0490000 CA762266 - Mitochodrial transcription terminationfactor-related family protein 5e+0 At4g08170 inositol 1,3,4-trisphosphate 5/6-kinase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 8e-2 40 Arabidopsis thaliana At3g46666 6240545 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.01 3e-2 42 Glycine max GmaAffx.46328.1.S1_at BM309375 - - 4e-6 At5g01020 protein kinase family protein C.G. S.X.
0.02 4e-2 40 Hordeum vulgare HVSMEi0013G17f_at HVSMEi0013G17f - - 2e+0 At4g07786 unknown protein C.G. S.X.
0.01 3e-2 42 Populus trichocarpa PtpAffx.225670.1.S1_at pmrna45186 hypothetical protein - 7e-11 At3g51290 proline-rich family protein C.G. S.X.
0.02 1e+0 36 Triticum aestivum TaAffx.122543.1.S1_at CA659572 - - 3e-1 At2g40080 ELF4 (EARLY FLOWERING 4) C.G. S.X.
0.01 4e-1 36 Vitis vinifera 1616923_s_at CB919379 - - 3e-1 At3g55790 unknown protein C.G. S.X.
0.01 1e-1 38 Zea mays Zm.6402.3.S1_a_at AI770444 DELLA protein DWARF8 /// dwarf plant9 - 8e-1 At5g42635 glycine-rich protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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