CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0133100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.76 92.2 Os02g0133100 AK060180.1 - Phosphatidylinositol transfer-like protein III 1e-18 At2g21520 transporter S.X. H.G.
0.42 53.9 Os12g0407500 AK100320.1 - Tyrosine specific protein phosphatase and dualspecificity protein phosphatase family protein 3e-84 At3g19420 ATPEN2 (ARABIDOPSIS THALIANA PTEN 2) S.X. H.G.
0.38 46.9 Os08g0318500 AK070862.1 - Sec8 exocyst complex component specific domaincontaining protein 4e-1 At3g10380 SEC8 (SUBUNIT OF EXOCYST COMPLEX 8) S.X. H.G.
0.36 44.0 Os03g0750800 AK061386.1 - Transcriptional adaptor ADA2b (AT4g16420/dl4235c) 9e-11 At4g16420 ADA2B (HOMOLOG OF YEAST ADA2 2B) S.X. H.G.
0.33 38.8 Os11g0661400 AK063910.1 - AAA ATPase, central region domain containingprotein 9e-37 At1g02890 AAA-type ATPase family protein S.X. H.G.
0.33 38.8 Os01g0772600 AK120893.1 - Casein kinase-like protein 6e-43 At3g03940 protein kinase family protein S.X. H.G.
0.29 31.1 Os12g0628500 AK122063.1 - Methionine aminopeptidase-like protein 2e-29 At3g59990 MAP2B (METHIONINE AMINOPEPTIDASE 2B) S.X. H.G.
0.28 31.1 Os03g0395600 AK063311.1 - Hypothetical protein 4e-1 At1g30260 - S.X. H.G.
0.25 24.1 Os09g0281600 AK067020.1 - SWAP/Surp domain containing protein 6e-12 At3g52120 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein S.X. H.G.
0.24 22.4 Os04g0118400 AK101166.1 - Elongation factor EF-2 (Fragment) 0 At1g56070 LOS1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.7 96.4 GSM159220 Seed (S5, 21 - 29 dap), biological rep 2 GSE6893 Expression data for reproductive development in rice
3.2 94.9 GSM409430 9311_young panicle 2cm, biological rep1 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
3.2 94.9 GSM409431 9311_young panicle 2cm, biological rep2 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
3.1 94.8 GSM159221 Seed (S5, 21 - 29 dap), biological rep 3 GSE6893 Expression data for reproductive development in rice
3.0 94.6 GSM159219 Seed (S5, 21 - 29 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
3.0 94.6 GSM159216 Seed (S4, 11 - 20 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
2.5 93.6 GSM195222 Ovary 2, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
2.4 93.3 GSM409422 Nipponbare_young panicle 2cm, biological rep2 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
2.4 93.3 GSM195228 Embryo GSE7951 Genome-wide gene expression profiling of rice stigma
2.4 93.3 GSM159217 Seed (S4, 11 - 20 dap), biological rep 2 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 1e-7 59 Os10g0122600 9638.m00247 - Cellular retinaldehyde-binding/triple function,N-terminal domain containing protein 1e-18 At4g36490 SFH12 (SEC14-LIKE 12) C.G. S.X.
0.06 7e-12 73 Os02g0133200 AK072646.1 - Cellular retinaldehyde binding/alpha-tocopheroltransport family protein 1e-9 At4g34580 COW1 (CAN OF WORMS1) C.G. S.X.
0.06 6e-3 44 Os05g0545000 AK066240.1 - Phosphatidylinositol transfer-like protein IV 5e-9 At2g18180 SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative C.G. S.X.
0.06 1e-1 40 Os08g0497300 AK068384.1 - Cellular retinaldehyde binding/alpha-tocopheroltransport family protein 5e-3 At2g21520 transporter C.G. S.X.
0.05 1e-7 59 Os02g0440900 9630.m02277 - Phosphatidylinositol transfer-like protein II 3e-28 At2g18180 SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative C.G. S.X.
0.04 3e-5 52 Os08g0341700 AK120904.1 - Phosphatidylinositol transfer-like protein II 1e-7 At4g34580 COW1 (CAN OF WORMS1) C.G. S.X.
0.02 2e-3 46 Os01g0701900 AK066793.1 - Phosphatidylinositol transfer-like protein III 2e-6 At1g75370 SEC14 cytosolic factor, putative / phosphatidylinositol transfer-like protein, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 1e-18 95 Arabidopsis thaliana At2g21520 816691 transporter F:transporter activity;P:transport;C:intracellular;MPFO - - - C.G. S.X.
0.14 9e-17 89 Glycine max Gma.5017.1.S1_at BI472180 - - 4e-42 At4g39170 SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative C.G. S.X.
0.36 8e-61 234 Hordeum vulgare Contig4378_s_at Contig4378 - - 4e-10 At1g19650 SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative C.G. S.X.
0.19 1e-9 65 Populus trichocarpa PtpAffx.204233.1.S1_at pmrna8323 hypothetical protein - 2e-60 At4g39170 SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative C.G. S.X.
0.16 5e-33 143 Triticum aestivum TaAffx.8969.1.S1_at CA617206 - - 2e-1 At2g04690 cellular repressor of E1A-stimulated genes (CREG) family C.G. S.X.
0.19 2e-23 109 Vitis vinifera 1612370_at CB974818 hypothetical protein LOC100252199 - 1e-46 At4g39170 SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative C.G. S.X.
0.49 1e-170 599 Zea mays Zm.6096.2.S1_at AJ006545 - - 2e-26 At2g21520 transporter C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006810 The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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