CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0123400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.62 81.5 Os02g0123400 9630.m00227 - Conserved hypothetical protein 1e+0 At1g73970 unknown protein S.X. H.G.
0.55 73.7 Os03g0268200 AK069243.1 - Protein kinase domain containing protein 3e-1 At2g37840 protein kinase family protein S.X. H.G.
0.51 68.7 Os05g0180600 AK111532.1 - Phosphatidylinositol 3-kinase, root isoform (EC2.7.1.137) (PI3- kinase) (PtdIns-3-kinase) (PI3K)(SPI3K-5) 3e-45 At1g60490 ATVPS34 S.X. H.G.
0.48 63.7 Os07g0690300 AK099674.1 - Zn-finger, RING domain containing protein 5e-10 At3g05670 PHD finger family protein S.X. H.G.
0.46 60.9 Os07g0626900 AK063254.1 - Zn-finger, RING domain containing protein 1e-13 At2g22010 RKP (Related to KPC1) S.X. H.G.
0.39 48.3 Os06g0166100 AK066174.1 - FAR1 domain containing protein 7e-3 At5g04510 PDK1 (3'-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1) S.X. H.G.
0.39 48.3 Os08g0430000 AK068194.1 - Conserved hypothetical protein 2e-1 At1g12630 DNA binding / transcription activator/ transcription factor S.X. H.G.
0.38 46.9 Os04g0488000 AK111619.1 - PITSLRE serine/threonine-protein kinase CDC2L1 (EC2.7.1.37) (Galactosyltransferase associated proteinkinase p58/GTA) (Cell division cycle 2-like 1) 2e-71 At1g67580 protein kinase family protein S.X. H.G.
0.32 36.3 Os02g0714000 AK067428.1 - RGP-3 (Fragment) 3e-1 At1g22910 RNA recognition motif (RRM)-containing protein S.X. H.G.
0.31 34.5 Os07g0461600 AK121366.1 - TA7 protein (Fragment) 1e+0 At2g19890 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
20.9 99.2 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
8.2 97.7 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.0 97.6 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.0 97.0 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
5.7 96.9 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.0 96.6 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.9 96.5 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.9 96.5 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.3 96.1 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.2 96.0 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 6e-4 48 Os06g0184000 9634.m00791 - - 2e-13 At4g30980 basic helix-loop-helix (bHLH) family protein C.G. S.X.
0.02 9e-3 44 Os11g0179000 AK062657.1 - Plant disease resistance response protein familyprotein 5e+0 At5g15970 KIN2 C.G. S.X.
0.01 2e-4 50 Os03g0371400 AK107816.1 - Cytochrome P450 family protein 4e+0 At4g37810 unknown protein C.G. S.X.
0.01 6e-4 48 Os10g0546200 CA759033 - Conserved hypothetical protein 2e-3 At5g04480 - C.G. S.X.
0.01 2e-3 46 Os08g0326500 AK109514.1 - Glycoside hydrolase, family 17 protein 1e-3 At4g17180 glycosyl hydrolase family 17 protein C.G. S.X.
0.01 2e-3 46 Os10g0430200 AK069040.1 - The start codon is not identified. 8e-1 At2g21730 CAD2 (CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 2) C.G. S.X.
0.01 9e-3 44 Os03g0377300 AK066201.1 - Conserved hypothetical protein 3e-2 At4g31790 diphthine synthase, putative (DPH5) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+0 36 Arabidopsis thaliana At1g73970 843735 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO - - - C.G. S.X.
0.03 1e-1 40 Glycine max GmaAffx.81742.1.S1_at BG363679 - - 1e-3 At4g02100 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
0.21 2e-68 260 Hordeum vulgare Contig21107_at Contig21107 - - 1e+0 At5g54970 unknown protein C.G. S.X.
0.05 3e-2 42 Populus trichocarpa PtpAffx.85122.1.S1_at DN486812 hypothetical protein - 2e+0 At5g28180 kelch repeat-containing F-box family protein C.G. S.X.
0.02 5e-3 44 Triticum aestivum TaAffx.8949.1.S1_at CA617569 - - 2e-1 At5g47770 FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1) C.G. S.X.
0.01 2e-2 40 Vitis vinifera 1618954_at CF404862 hypothetical protein LOC100256489 - 6e-6 At1g73970 unknown protein C.G. S.X.
0.01 5e-1 36 Zea mays Zm.6207.4.A1_at BQ538453 Hypothetical protein LOC100194345 - 6e-19 At2g04390 40S ribosomal protein S17 (RPS17A) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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