CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0112100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.59 78.0 Os02g0112100 AB008519.1 - BCH2 2e-8 At1g08090 ATNRT2:1 (NITRATE TRANSPORTER 2:1) S.X. H.G.
0.73 91.1 Os02g0595900 9630.m03670 - Conserved hypothetical protein 1e+0 At5g50200 WR3 (WOUND-RESPONSIVE 3) S.X. H.G.
0.50 68.0 Os02g0112600 AK109733.1 - Membrane transporter 2e-8 At1g08090 ATNRT2:1 (NITRATE TRANSPORTER 2:1) S.X. H.G.
0.40 51.1 Os02g0583700 AU095601 - Conserved hypothetical protein 5e+0 At5g20120 unknown protein S.X. H.G.
0.13 8.2 Os03g0762300 AK058884.1 - - 6e-1 At2g24800 peroxidase, putative S.X. H.G.
0.12 7.2 Os01g0681900 AK105755.1 - Glutamate synthase [NADH], chloroplast precursor(EC 1.4.1.14) (NADH- GOGAT) 1e-144 At5g53460 GLT1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
26.1 99.5 GSM359907 FL478 root, salt-treated, biological replicate 3 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
25.3 99.5 GSM154829 Root_DMSO-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
23.1 99.3 GSM154832 Root_DMSO-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
20.9 99.2 GSM154831 Root_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
19.0 99.0 GSM154939 Root_DMSO-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
18.4 99.0 GSM154941 Root_DMSO-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
18.0 98.9 GSM359918 IR63731 root, salt-treated, biological replicate 3 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
17.5 98.9 GSM154940 Root_DMSO-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
15.7 98.7 GSM359905 FL478 root, salt-treated, biological replicate 1 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
14.1 98.5 GSM359923 Pokkali root, salt-treated, biological replicate 2 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.84 0 3003 Os02g0112600 AK109733.1 - Membrane transporter 2e-8 At1g08090 ATNRT2:1 (NITRATE TRANSPORTER 2:1) C.G. S.X.
0.24 1e-13 79 Os01g0704100 AK109776.1 - - 2e-5 At1g12940 ATNRT2.5 (nitrate transporter2.5) C.G. S.X.
0.15 9e-129 462 Os02g0207100 AK119766.1 - BCH1 1e+0 At2g11005 glycine-rich protein C.G. S.X.
0.01 8e-3 44 Os12g0147500 AK066803.1 - DEAD/DEAH box helicase domain containing protein 2e-1 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) C.G. S.X.
0.01 3e-2 42 Os04g0401200 9632.m03140 - - 3e+0 At4g00030 plastid-lipid associated protein PAP / fibrillin family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 2e-8 61 Arabidopsis thaliana At1g08090 837327 ATNRT2:1 (NITRATE TRANSPORTER 2:1) High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake. - - - C.G. S.X.
0.12 2e-39 165 Glycine max Gma.8482.1.S1_at AF047718.1 NRT2 protein - 1e-27 At5g60770 ATNRT2.4 C.G. S.X.
0.63 8e-120 430 Hordeum vulgare Contig17222_at Contig17222 - - 4e-12 At1g08090 ATNRT2:1 (NITRATE TRANSPORTER 2:1) C.G. S.X.
0.05 2e-11 71 Populus trichocarpa Ptp.5713.2.S1_a_at AJ557585.1 high affinity nitrate transporter - 7e-6 At5g60770 ATNRT2.4 C.G. S.X.
0.64 0 670 Triticum aestivum Ta.264.1.S1_at AF332214.1 high affinity nitrate transporter - 2e-11 At5g60770 ATNRT2.4 C.G. S.X.
0.02 7e-2 38 Vitis vinifera 1620004_x_at CF204829.1 - - 5e-3 At1g51080 unknown protein C.G. S.X.
0.70 0 1473 Zea mays Zm.10344.1.S1_at AY129953.1 nrt2.1 protein - 2e-4 At1g08090 ATNRT2:1 (NITRATE TRANSPORTER 2:1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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