CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os02g0107600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.39 48.3 Os02g0107600 AK067983.1 - Conserved hypothetical protein 3e-2 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) S.X. H.G.
0.73 91.1 Os02g0566700 AK102754.1 - - 2e+0 At5g66170 - S.X. H.G.
0.73 91.1 Os03g0740700 AK102723.1 - Protein similar to CwfJ, C-terminal 1 domaincontaining protein 3e-4 At1g56290 CwfJ-like family protein S.X. H.G.
0.57 77.0 Os01g0934300 AK072640.1 - Flowering-time protein isoform beta 5e-4 At4g02560 LD (luminidependens) S.X. H.G.
0.53 71.3 Os05g0587400 AK063828.1 - contains InterPro domain(s): IPR010989 2e-7 At4g27620 unknown protein S.X. H.G.
0.50 68.0 Os01g0549500 AK070641.1 - Phox-like domain containing protein 1e-3 At3g48195 phox (PX) domain-containing protein S.X. H.G.
0.44 58.1 Os02g0823800 AK120318.1 - - 1e-1 At2g42680 MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
17.9 98.9 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.6 98.7 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.1 98.6 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.1 98.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.9 98.3 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.9 98.3 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.6 98.2 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.5 98.2 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.3 98.2 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.2 98.2 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.22 0 1291 Os02g0109200 AK108815.1 - Hypothetical protein 3e-2 At3g06180 structural constituent of ribosome C.G. S.X.
0.12 6e-128 460 Os02g0108500 AK063089.1 - Hypothetical protein 5e-1 At4g23420 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 3e-2 42 Arabidopsis thaliana At1g70895 843428 CLE17 (CLAVATA3/ESR-RELATED 17) Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. - - - C.G. S.X.
0.01 1e-1 40 Glycine max HgAffx.16354.1.S1_at CB280002 - - 6e-1 At5g53950 CUC2 (CUP-SHAPED COTYLEDON 2) C.G. S.X.
0.02 2e-1 38 Hordeum vulgare Contig13583_at Contig13583 - - 6e+0 At3g60780 unknown protein C.G. S.X.
0.01 2e+0 36 Populus trichocarpa PtpAffx.95281.1.A1_at CV254077 - - 2e+0 At5g52690 heavy-metal-associated domain-containing protein C.G. S.X.
0.01 7e-3 44 Triticum aestivum TaAffx.58132.1.S1_at CA622200 - - 1e+0 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) C.G. S.X.
0.02 7e+0 32 Vitis vinifera 1620903_at CF605711 hypothetical protein LOC100260422 - 2e-12 At5g60460 sec61beta family protein C.G. S.X.
0.01 7e-1 36 Zea mays ZmAffx.1018.1.S1_at AI881527 hypothetical protein LOC100279255 - 5e-2 At1g58420 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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