CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0973500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 95.8 Os01g0973500 AK069546.1 - Protein kinase APK1A (EC 2.7.1.-) 7e-48 At1g07570 APK1A S.X. H.G.
0.09 4.9 Os02g0740400 AK070261.1 - Lipolytic enzyme, G-D-S-L family protein 3e+0 At2g32890 RALFL17 (RALF-LIKE 17) S.X. H.G.
0.07 3.7 Os10g0560700 AK064207.1 - Pathogenesis-related transcriptional factor andERF domain containing protein 2e-2 At3g06870 proline-rich family protein S.X. H.G.
0.06 3.0 Os02g0692000 AK070774.1 - - 2e-8 At3g03550 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.03 1.4 Os09g0299400 9637.m01005 - Sodium-and chloride-activated ATP-sensitivepotassium channel 3e+0 At2g36026 - S.X. H.G.
0.02 1.0 Os08g0166400 AK110809.1 - SWIM Zn-finger domain containing protein 9e-1 At5g13240 transcription regulator S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
50.2 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
30.6 99.7 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.1 99.4 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.5 99.2 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.0 99.0 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.1 98.8 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.4 98.8 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.5 98.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.4 98.5 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.9 98.4 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 2e-126 454 Os05g0110900 AK073169.1 - Protein kinase APK1B (EC 2.7.1.-) 7e-39 At1g07570 APK1A C.G. S.X.
0.35 5e-96 353 Os03g0274800 AK102905.1 - Protein kinase APK1A (EC 2.7.1.-) 1e-6 At2g28930 APK1B C.G. S.X.
0.21 1e-34 149 Os03g0821900 AK070847.1 - Protein kinase domain containing protein 3e-38 At1g07570 APK1A C.G. S.X.
0.04 1e-19 99 Os01g0887900 NM_190196.1 - - 1e+0 At1g75750 GASA1 (GAST1 PROTEIN HOMOLOG 1) C.G. S.X.
0.03 2e-15 85 Os02g0777800 AK066978.1 - Protein kinase domain containing protein 2e-9 At5g35580 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.20 5e-48 192 Arabidopsis thaliana At1g07570 837271 APK1A Protein kinase capable of phosphorylating tyrosine, serine, and threonine residues - - - C.G. S.X.
0.14 1e-15 85 Glycine max Gma.3830.1.S1_at BE658289 - - 4e-17 At1g07570 APK1A C.G. S.X.
0.43 3e-134 478 Hordeum vulgare Contig9237_at Contig9237 - - 6e-8 At1g07570 APK1A C.G. S.X.
0.07 3e-7 57 Populus trichocarpa PtpAffx.151163.1.S1_at CX173673 hypothetical protein - 6e-15 At2g28930 APK1B C.G. S.X.
0.32 1e-33 145 Triticum aestivum Ta.3054.2.S1_at CK206963 - - 4e-14 At1g07570 APK1A C.G. S.X.
0.04 2e-4 46 Vitis vinifera 1616357_at CF516994 hypothetical protein LOC100255530 - 5e-16 At2g17220 protein kinase, putative C.G. S.X.
0.44 2e-128 458 Zea mays Zm.13719.1.A1_at AY106357.1 protein kinase APK1A - 1e-12 At1g07570 APK1A C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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