CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0965300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os01g0965300 AK111057.1 - Hypothetical protein 5e+0 At5g28800 unknown protein S.X. H.G.
0.50 68.0 Os11g0471200 AK066957.1 - Conserved hypothetical protein 9e-2 At1g15430 - S.X. H.G.
0.22 19.4 Os10g0186800 9638.m00950 - Nucleic acid-binding OB-fold domain containingprotein 8e+0 At5g55940 emb2731 (embryo defective 2731) S.X. H.G.
0.21 17.9 Os01g0750100 AK067329.1 - WRKY transcription factor 31 1e-11 At3g58710 WRKY69 S.X. H.G.
0.01 0.5 Os10g0498300 AK060338.1 - Epoxide hydrolase 2e+0 At5g59870 HTA6 S.X. H.G.
0.01 0.5 Os04g0293300 AK111082.1 - Tropinone reductase-I (EC 1.1.1.206) (TR-I)(Tropine dehydrogenase) 3e-1 At4g08593 unknown protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
79.8 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
41.6 99.9 GSM207558 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
37.8 99.8 GSM304390 Stable transgenic rice line GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
35.1 99.8 GSM207559 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
34.3 99.8 GSM207562 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
33.1 99.8 GSM207563 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
30.0 99.7 GSM207560 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
29.7 99.7 GSM207564 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
25.0 99.5 GSM304397 Control for the stable transgenic rice line (1) GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
24.5 99.4 GSM304394 Stable transgenic rice line (1) GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 8e-25 115 Os07g0248900 AK066571.1 - Hypothetical protein 2e+0 At4g29470 phospholipase A2, putative C.G. S.X.
0.02 1e-1 38 Os01g0198900 AK069974.1 - Conserved hypothetical protein 1e-1 At2g35960 NHL12 C.G. S.X.
0.02 6e-1 36 Os10g0476100 9638.m02944 - Serine/threonine protein kinase family protein 3e-28 At4g14350 protein kinase family protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e+0 32 Arabidopsis thaliana At5g28800 832996 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.03 1e-1 38 Glycine max Gma.9596.1.A1_at BU550832 - - 7e-2 At5g09310 unknown protein C.G. S.X.
0.04 2e+0 32 Hordeum vulgare HVSMEf0010L07r2_at HVSMEf0010L07r2 - - 7e+0 At5g08480 VQ motif-containing protein C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.76466.1.A1_at CV229438 hypothetical protein - 5e-2 At1g51440 lipase class 3 family protein C.G. S.X.
0.03 8e-2 38 Triticum aestivum TaAffx.31777.1.S1_at CA607826 - - 3e-1 At5g28610 - C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1607848_at CB339435 hypothetical protein LOC100248102 - 1e+0 At4g29530 2,3-diketo-5-methylthio-1-phosphopentane phosphatase family C.G. S.X.
0.03 5e-1 34 Zea mays Zm.19284.1.A1_at CO524123 hypothetical protein LOC100274557 - 2e-1 At3g51010 unknown protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage