CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0964600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.44 58.1 Os01g0964600 9629.m07268 - - 8e-1 At5g66815 unknown protein S.X. H.G.
0.67 87.2 Os04g0599950 9633.m02361 - - 7e+0 At5g54530 unknown protein S.X. H.G.
0.60 79.7 Os11g0527700 AU097541 - - 2e-2 At3g61260 DNA-binding family protein / remorin family protein S.X. H.G.
0.60 79.7 Os12g0146750 9640.m00436 - - 1e+0 At3g53470 unknown protein S.X. H.G.
0.55 73.7 Os01g0188850 NM_189648.1 - - 1e+0 At3g52420 OEP7 (OUTER ENVELOPE MEMBRANE PROTEIN 7) S.X. H.G.
0.47 62.3 Os04g0689200 9632.m05799 - - 6e+0 At5g15190 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
111.6 100.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
81.8 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
30.4 99.7 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.7 99.6 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.8 99.5 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.1 98.7 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.6 98.6 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.6 98.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.0 98.5 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.4 98.5 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 1e-53 212 Os05g0361600 9633.m02693 - - 4e-2 At5g61250 AtGUS1 (Arabidopsis thaliana glucuronidase 1) C.G. S.X.
0.02 7e-6 54 Os01g0889900 AK099945.1 - S-locus glycoprotein family protein 1e-3 At1g34300 lectin protein kinase family protein C.G. S.X.
0.02 3e-2 42 Os08g0126100 9636.m00235 - - 5e+0 At2g35090 unknown protein C.G. S.X.
0.01 2e-3 46 Os07g0613500 AK071281.1 - Protein kinase APK1B (EC 2.7.1.-) 4e-15 At5g35580 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase C.G. S.X.
0.01 7e-3 44 Os11g0144900 AK120954.1 - - 2e-2 At1g31120 KUP10 C.G. S.X.
0.01 3e-2 42 Os04g0625300 AU172759 - Hypothetical protein 2e-1 At3g15353 MT3 (METALLOTHIONEIN 3) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e-1 36 Arabidopsis thaliana At5g66815 836815 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.02 1e+0 36 Glycine max PsAffx.psZG004xB16f_s_at PsAffx.psZG004xB16f - - 2e+0 At2g37630 AS1 (ASYMMETRIC LEAVES 1) C.G. S.X.
0.02 2e-3 44 Hordeum vulgare Contig4306_s_at Contig4306 - - 6e+0 At4g38740 ROC1 (ROTAMASE CYP 1) C.G. S.X.
0.02 1e+0 36 Populus trichocarpa PtpAffx.218951.1.S1_at pmrna34716 hypothetical protein - 1e-2 At5g64470 unknown protein C.G. S.X.
0.04 2e-1 38 Triticum aestivum TaAffx.55443.1.S1_at CA666046 - - 1e+1 At4g34970 ADF9 (ACTIN DEPOLYMERIZING FACTOR 9) C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1616555_s_at CB343780 - - 1e+1 At4g35165 unknown protein C.G. S.X.
0.02 1e-3 44 Zea mays Zm.436.1.S1_at AF100455.1 liguleless3 - 2e-10 At1g62360 STM (SHOOT MERISTEMLESS) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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