CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0963000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 68.0 Os01g0963000 AK109480.1 - Peroxidase BP 1 precursor 6e-1 At5g40150 peroxidase, putative S.X. H.G.
0.50 68.0 Os01g0160800 AB051108.1 - Protein synthesis inhibitor II (EC 3.2.2.22)(Ribosome-inactivating protein II) (rRNA N-glycosidase) 7e-1 At2g43570 chitinase, putative S.X. H.G.
0.44 58.1 Os12g0518200 AK070844.1 - Protein of unknown function DUF6 domain containingprotein 3e+0 At4g26290 unknown protein S.X. H.G.
0.31 34.5 Os11g0229500 AB019240.2 - - 2e+0 At5g13510 ribosomal protein L10 family protein S.X. H.G.
0.29 31.1 Os07g0162600 AK106274.1 - Esterase/lipase/thioesterase domain containingprotein 9e-1 At5g16080 AtCXE17 (Arabidopsis thaliana carboxyesterase 17) S.X. H.G.
0.29 31.1 Os07g0542400 AK111840.1 - Protein kinase domain containing protein 3e-4 At4g23260 ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
30.5 99.7 GSM174889 H FR13 4 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
22.8 99.3 GSM174886 F FR13 4 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
20.4 99.1 GSM154955 Leaf_tZ-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
20.2 99.1 GSM421689 XOO, 2 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
19.5 99.1 GSM154949 Leaf_tZ-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
19.5 99.1 GSM421668 XOC, 2 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
19.4 99.0 GSM154956 Leaf_tZ-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
19.2 99.0 GSM154950 Leaf_tZ-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
19.0 99.0 GSM154954 Leaf_tZ-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
17.6 98.9 GSM154948 Leaf_tZ-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.49 2e-95 351 Os01g0962700 BU673129 - Peroxidase 12 precursor (EC 1.11.1.7) (AtperoxP12) (PRXR6) (ATP4a) 5e-2 At1g71695 peroxidase 12 (PER12) (P12) (PRXR6) C.G. S.X.
0.29 3e-23 111 Os01g0963200 9629.m07251 - Peroxidase BP 1 precursor 1e-7 At1g71695 peroxidase 12 (PER12) (P12) (PRXR6) C.G. S.X.
0.28 1e-37 159 Os01g0962900 NM_189373.1 - Peroxidase (EC 1.11.1.7) (Fragment) 5e-4 At1g14540 anionic peroxidase, putative C.G. S.X.
0.08 1e-16 89 Os02g0240100 AK108037.1 - Peroxidase (EC 1.11.1.7) 7e-4 At5g05340 peroxidase, putative C.G. S.X.
0.06 6e-21 103 Os07g0104400 9635.m00042 - Haem peroxidase, plant/fungal/bacterial familyprotein 2e-3 At5g40150 peroxidase, putative C.G. S.X.
0.02 2e-1 36 Os05g0536400 AK121765.1 - Delta-1-pyrroline-5-carboxylate dehydrogenase (EC1.5.1.12) 7e-14 At5g62530 ALDH12A1 C.G. S.X.
0.02 2e-1 36 Os09g0452900 AK068378.1 - Glycosyl transferase, family 31 protein 6e-14 At1g05170 galactosyltransferase family protein C.G. S.X.
0.02 2e-1 36 Os11g0161100 AK064948.1 - - 7e-2 At2g47530 - C.G. S.X.
0.01 2e-1 36 Os01g0938900 AK101971.1 - Alpha-NAC protein (Fragment) 2e-30 At3g12390 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative C.G. S.X.
0.01 2e-1 36 Os10g0539900 AK102640.1 - Sugar transporter family protein 1e-22 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e-1 36 Arabidopsis thaliana At5g40150 834012 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB - - - C.G. S.X.
0.06 4e-12 73 Glycine max Gma.4305.3.S1_a_at BG044173 - - 5e-8 At5g57940 ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5) C.G. S.X.
0.21 2e-18 93 Hordeum vulgare EBro03_SQ003_J21_at EBro03_SQ003_J21 - - 8e-1 At5g04386 unknown protein C.G. S.X.
0.02 4e+0 34 Populus trichocarpa PtpAffx.219521.1.S1_at pmrna35464 hypothetical protein - 9e-1 At1g78200 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
0.36 4e-30 133 Triticum aestivum Ta.21307.2.S1_x_at CK196925 - - 5e-5 At1g44970 peroxidase, putative C.G. S.X.
0.03 3e+0 32 Vitis vinifera 1611797_at CF208103 hypothetical protein LOC100257001 - 3e-38 At2g30060 Ran-binding protein 1b (RanBP1b) C.G. S.X.
0.22 2e-30 133 Zea mays Zm.2136.1.S1_at AW282383 hypothetical protein LOC100192761 - 5e-5 At1g44970 peroxidase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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