CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0960300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 82.7 Os01g0960300 BI813093 - Glucose inhibited division protein A 7e+0 At5g57510 unknown protein S.X. H.G.
0.80 94.6 Os08g0407000 CB658542 - ab initio prediction with EST support 8e-6 At1g78010 tRNA modification GTPase, putative S.X. H.G.
0.77 93.1 Os09g0363100 AK065958.1 - Protein of unknown function UPF0044 family protein 4e-4 At4g29750 RNA binding S.X. H.G.
0.67 87.2 Os03g0334100 AK120587.1 - Hypothetical protein 8e-1 At3g44755 unknown protein S.X. H.G.
0.60 79.7 Os05g0519600 AK102422.1 - 4-methyl-5(B-hydroxyethyl)-thiazol monophosphatebiosynthesis enzyme 7e-2 At5g48953 LCR86 (Low-molecular-weight cysteine-rich 86) S.X. H.G.
0.44 58.1 Os04g0466100 AK064543.1 - Cell division protein FtsH-like protein 3e-7 At3g02450 cell division protein ftsH, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.1 98.3 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.5 98.1 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.4 97.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
8.6 97.8 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.5 97.7 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
8.4 97.7 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.2 97.7 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.8 97.6 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.2 97.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.1 97.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e-1 40 Os05g0213500 AK065280.1 - Conserved hypothetical protein 6e-7 At5g53160 unknown protein C.G. S.X.
0.02 3e+0 32 Os03g0115300 9634.m01759 - TPR-like domain containing protein 5e+0 At1g63960 unknown protein C.G. S.X.
0.02 3e+0 32 Os08g0357000 BQ905925 - Conserved hypothetical protein 3e+1 At4g01340 CHP-rich zinc finger protein-related C.G. S.X.
0.01 1e-1 40 Os02g0209100 AK105040.1 - Coatomer WD associated region domain containingprotein 5e-9 At1g52360 coatomer protein complex, subunit beta 2 (beta prime), putative C.G. S.X.
0.01 6e-1 38 Os04g0450100 AK100647.1 - Protein of unknown function DUF341 family protein 5e-4 At4g24380 unknown protein C.G. S.X.
0.01 6e-1 38 Os05g0399200 AK101507.1 - Endo-1,3;1,4-beta-D-glucanase precursor (EC3.2.1.-) 2e-3 At3g23600 dienelactone hydrolase family protein C.G. S.X.
0.01 6e-1 38 Os07g0184900 AK102995.1 - ATP-dependent DNA helicase, 70 kDa subunit familyprotein 8e-6 At1g16970 KU70 (ARABIDOPSIS THALIANA KU70 HOMOLOG) C.G. S.X.
0.01 2e-1 36 Os01g0290700 AK058263.1 - MDR-like p-glycoprotein 2e-31 At3g62150 PGP21 (P-GLYCOPROTEIN 21) C.G. S.X.
0.01 2e-1 36 Os01g0290800 AK119474.1 - ABC transporter, transmembrane region domaincontaining protein 2e-29 At3g62150 PGP21 (P-GLYCOPROTEIN 21) C.G. S.X.
0.01 8e-1 34 Os02g0453800 AK069657.1 - Hypothetical protein 2e+0 At3g54170 ATFIP37 (ARABIDOPSIS THALIANA FKBP12 INTERACTING PROTEIN 37) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 7e+0 30 Arabidopsis thaliana At5g57510 835855 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P - - - C.G. S.X.
0.06 9e+0 30 Glycine max GmaAffx.16243.1.A1_at AW154801 - - 2e+0 At1g75190 unknown protein C.G. S.X.
0.04 3e+0 30 Hordeum vulgare HS08I15u_at HS08I15u - - 4e+0 At1g16530 ASL9 (ASYMMETRIC LEAVES 2 LIKE 9) C.G. S.X.
0.04 6e-1 34 Populus trichocarpa PtpAffx.217006.1.S1_at pmrna32105 hypothetical protein - 1e+0 At5g22608 unknown protein C.G. S.X.
0.06 2e+0 32 Triticum aestivum Ta.16440.1.S1_at CA606518 - - 3e+0 At4g19360 unknown protein C.G. S.X.
0.06 2e+0 30 Vitis vinifera 1612976_at CF208349 hypothetical protein LOC100245405 - 5e-27 At1g01050 AtPPa1 (Arabidopsis thaliana pyrophosphorylase 1) C.G. S.X.
0.04 1e+1 28 Zea mays ZmAffx.455.1.A1_at AI677194 hypothetical protein LOC100194007 - 3e+0 At1g44085 glycine-rich protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0022900 A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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