Gene omics information

Query gene ID Os01g0946200
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9799.9Os01g0946200AK071060.1--2e+0At2g01554unknown proteinS.X.H.G.
0.5269.6Os11g0160500AY224425.1-BZIP-like protein8e-11At1g43700VIP1 (VIRE2-INTERACTING PROTEIN 1)S.X.H.G.
0.4253.9Os01g0752100NM_191251.1-Cyclin-like F-box domain containing protein7e-1At1g07950surfeit locus protein 5 family protein / SURF5 family proteinS.X.H.G.
0.3846.9Os05g0458000AK068989.1-Zn-finger, DHHC type domain containing protein8e-13At3g09320zinc finger (DHHC type) family proteinS.X.H.G.
0.3745.0Os10g0495300AK103856.1-BRO1 domain containing protein7e-15At1g15130hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.3338.8Os03g0138000AK069986.1-TPR-like domain containing protein2e-2At3g26180CYP71B20S.X.H.G.
0.3134.5Os04g0528800AK103671.1-Ferredoxin-thioredoxin reductase, variable chain(FTR-V) (Ferredoxin- thioredoxin reductase subunit A)(FTR-A)4e-1At2g05440glycine-rich proteinS.X.H.G.
0.3032.7Os01g0919500AK059108.1-Zn-finger, RING domain containing protein2e+0At2g01260unknown proteinS.X.H.G.
0.2931.1Os01g0964000AK073599.1-VAMP-like protein YKT61 (AtYKT61)(Geranylgeranylated protein 1) (AtGP1)3e-15At5g58060YKT61S.X.H.G.
0.2625.6Os04g0550500AK070256.1-Acetylglutamate kinase (EC 2.7.2.8) (NAG kinase)(AGK) (N-acetyl-L- glutamate 5-phosphotransferase)1e-2At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.898.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.298.0GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.397.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.197.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in Musa
8.997.8GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.797.6GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.797.6GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.697.5GSM278845WuYun3-RSV infected, biological rep2GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
7.697.5GSM278853KT95-418-non-infected, biological rep1GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
7.497.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.091e-24115Os01g0946500AU031458-Glucan endo-1,3-beta-glucosidase GV (EC 3.2.1.39)((1->3)-beta-glucan endohydrolase GV)((1->3)-beta-glucanase isoenzyme GV) (Beta-1,3-endoglucanase GV)1e+1At4g29460phospholipase A2 gamma, secretory low molecular weightC.G.S.X.
0.044e-344Os06g02391009634.m01307-Peptidase M10A and M12B, matrixin and adamalysinfamily protein2e-3At2g45040matrix metalloproteinaseC.G.S.X.
0.031e-242Os02g01732009630.m00720-VQ domain containing protein1e-5At4g15120VQ motif-containing proteinC.G.S.X.
0.031e-242Os02g0574800AK108451.1-Conserved hypothetical protein4e-1At2g02760ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2)C.G.S.X.
0.021e-242Os09g03241009637.m01284--2e+0At3g57390AGL18C.G.S.X.
0.021e-242Os11g0633800AK099786.1-Cyclin-like F-box domain containing protein3e-3At4g29460phospholipase A2 gamma, secretory low molecular weightC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Arabidopsis thalianaAt2g015546240605unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.031e-242Glycine maxGmaAffx.91503.1.S1_atCF807228--4e+0At4g24026unknown proteinC.G.S.X.
0.041e-240Hordeum vulgareContig4897_atContig4897--8e-1At1g04445zinc finger (C2H2 type) family proteinC.G.S.X.
0.021e+132Populus trichocarpaPtpAffx.88591.1.A1_s_atCV259964--8e-1At2g46190-C.G.S.X.
0.041e-138Triticum aestivumTaAffx.57536.1.S1_atCA627341--2e-1At2g36100integral membrane family proteinC.G.S.X.
0.022e+032Vitis vinifera1615287_atCB968784--4e-3At5g61500ATG3C.G.S.X.
0.032e-136Zea maysZm.7361.1.A1_atAY108454.1hypothetical protein LOC100272701-6e-1At5g54360zinc finger (C2H2 type) family protein-relatedC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage