CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0937600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.37 45.0 Os01g0937600 AK064091.1 - Peptidase aspartic family protein 1e+1 At5g44500 small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative S.X. H.G.
0.55 73.7 Os02g0813100 9630.m05643 - Cyclin-like F-box domain containing protein 4e+0 At5g38300 unknown protein S.X. H.G.
0.44 58.1 Os11g0637200 AK106745.1 - Sugar transporter protein 3e-3 At3g18830 ATPLT5 (POLYOL TRANSPORTER 5) S.X. H.G.
0.40 51.1 Os10g0439200 9638.m02604 - Alpha-expansin OsEXPA25 1e-4 At2g37640 EXP3 S.X. H.G.
0.16 11.3 Os04g0545400 9632.m04441 - Plastocyanin-like domain containing protein 4e+0 At5g25090 plastocyanin-like domain-containing protein S.X. H.G.
0.09 4.9 Os10g0481100 AK106746.1 - Aquaporin PIP2.1 (Plasma membrane intrinsicprotein 2a) (PIP2a) 2e-7 At2g37180 RD28 (RESPONSIVE TO DESICCATION 28) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
27.9 99.6 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.5 99.6 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.1 99.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.5 99.4 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.2 99.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.5 99.4 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.8 99.3 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.7 99.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.3 99.3 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.4 98.8 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.46 4e-127 456 Os01g0937500 AK108977.1 - Peptidase aspartic family protein 3e+0 At2g28900 ATOEP16-1 (OUTER PLASTID ENVELOPE PROTEIN 16-1) C.G. S.X.
0.10 1e-10 69 Os01g0936900 AK073591.1 - Peptidase aspartic family protein 1e+1 At5g64667 IDL2 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 2) C.G. S.X.
0.04 1e-10 69 Os01g0937100 AK105806.1 - Xylanase inhibitor precursor 1e+1 At5g56840 DNA-binding family protein C.G. S.X.
0.04 6e-3 44 Os01g0937000 AK108620.1 - Peptidase aspartic family protein 7e-1 At3g15640 cytochrome c oxidase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+1 32 Arabidopsis thaliana At5g44500 834477 small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative F:molecular_function unknown;P:unknown;C:nucleolus, small nucleolar ribonucleoprotein complex, nucleus;MPFBOVA - - - C.G. S.X.
0.02 3e-1 38 Glycine max GmaAffx.39950.1.S1_s_at BE583687 - - 3e+0 At2g44770 phagocytosis and cell motility protein ELMO1-related C.G. S.X.
0.03 9e-2 38 Hordeum vulgare Contig22935_at Contig22935 - - 4e-3 At4g12070 unknown protein C.G. S.X.
0.02 1e+0 36 Populus trichocarpa PtpAffx.214760.1.S1_at pmrna28597 hypothetical protein - 4e-1 At5g47700 60S acidic ribosomal protein P1 (RPP1C) C.G. S.X.
0.11 4e-15 83 Triticum aestivum Ta.16530.1.A1_at CA607972 - - 5e+0 At5g42635 glycine-rich protein C.G. S.X.
0.02 1e+1 30 Vitis vinifera 1618802_s_at CF205022.1 hypothetical protein LOC100264326 - 9e-4 At1g34780 ATAPRL4 (APR-like 4) C.G. S.X.
0.02 8e-2 38 Zea mays Zm.271.1.S1_at L44133.1 rough sheath1 - 4e-15 At4g08150 KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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