CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0934800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0934800 Z34270.1 - Alpha/beta hydrolase fold domain containingprotein 1e-1 At2g23580 MES4 (METHYL ESTERASE 4) S.X. H.G.
0.77 93.1 Os08g0156100 AK063249.1 - Conserved hypothetical protein 1e+0 At3g23170 unknown protein S.X. H.G.
0.61 81.2 Os01g0627600 AK101667.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 1e-2 At3g14630 CYP72A9 S.X. H.G.
0.61 81.2 Os10g0527400 D10861.1 - Glutathione S-transferase TSI-1 (EC 2.5.1.18)(Glutathione S- transferase 1) 5e-1 At2g29450 ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5) S.X. H.G.
0.57 77.0 Os03g0283200 AF237487.2 - IN2-1 protein 2e+0 At5g02780 In2-1 protein, putative S.X. H.G.
0.50 68.0 Os01g0126100 AK106990.1 - Calycin family protein 4e+0 At5g39530 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
103.6 100.0 GSM100446 Rice Bala 1ppm Arsenate Rep2 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
78.8 99.9 GSM100445 Rice Bala 1ppm Arsenate Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
52.0 99.9 GSM149410 Rice Azucena 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
38.6 99.8 GSM100442 Rice Azucena 1ppm Arsenate Rep2 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
24.7 99.4 GSM149412 Rice Bala 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
14.9 98.6 GSM173093 Rice OsSRT1 RNAi transgenic line LM2 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
13.9 98.5 GSM302920 root_rep1 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
13.0 98.4 GSM100441 Rice Azucena 1ppm Arsenate Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
5.8 97.0 GSM359920 Pokkali root, control, biological replicate 2 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
4.1 96.0 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.54 1e-64 248 Os01g0934700 AK072603.1 - Esterase/lipase/thioesterase domain containingprotein 5e-4 At2g23580 MES4 (METHYL ESTERASE 4) C.G. S.X.
0.25 0 837 Os01g0934500 AK099792.1 - - 2e-3 At2g23580 MES4 (METHYL ESTERASE 4) C.G. S.X.
0.25 3e-22 107 Os11g0492700 9639.m02716 - Esterase/lipase/thioesterase domain containingprotein 1e-3 At4g37140 MEE69 (MATERNAL EFFECT EMBRYO ARREST 69) C.G. S.X.
0.23 1e-43 178 Os05g0370700 AK108862.1 - Alpha/beta hydrolase family protein 1e-4 At4g37140 MEE69 (MATERNAL EFFECT EMBRYO ARREST 69) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 1e-1 38 Arabidopsis thaliana At2g23580 816890 MES4 (METHYL ESTERASE 4) Encodes a protein shown to have carboxylesterase activity and methyl salicylate esterase activity in vitro. This protein does not act on methyl IAA, methyl JA, MeGA4, or MEGA9 in vitro. - - - C.G. S.X.
0.03 4e-2 40 Glycine max GmaAffx.47773.1.A1_at CD406625 - - 7e-1 At3g27160 GHS1 (GLUCOSE HYPERSENSITIVE 1) C.G. S.X.
0.64 1e-135 482 Hordeum vulgare Contig10057_at Contig10057 - - 8e-6 At2g23580 MES4 (METHYL ESTERASE 4) C.G. S.X.
0.03 4e-2 40 Populus trichocarpa PtpAffx.217502.1.S1_at pmrna32789 hypothetical protein - 2e+1 At5g18790 ribosomal protein L33 family protein C.G. S.X.
0.48 3e-64 246 Triticum aestivum TaAffx.122333.1.S1_at CA725295 - - 2e-3 At2g23580 MES4 (METHYL ESTERASE 4) C.G. S.X.
0.03 4e-2 38 Vitis vinifera 1614154_at CF568802 - - 7e-8 At1g72440 EDA25 (embryo sac development arrest 25) C.G. S.X.
0.22 5e-27 121 Zea mays Zm.11688.1.A1_at CK347476 esterase PIR7B - 2e+0 At5g08540 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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