Gene omics information

Query gene ID Os01g0927600
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5371.3Os01g0927600AK072309.1-AUX/IAA protein family protein6e-28At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)S.X.H.G.
0.3134.5Os01g0872700AK100381.1-Putative 5-3 exonuclease domain containing protein2e-19At1g75660XRN3S.X.H.G.
0.2321.2Os06g0111400AK069834.1-Guanine nucleotide binding protein (G-protein),alpha subunit family protein7e-40At1g31930XLG3 (extra-large GTP-binding protein 3)S.X.H.G.
0.2219.4Os05g0411300AK073142.1-Conserved hypothetical protein1e-3At3g56660BZIP49 (BASIC REGION/LEUCINE ZIPPER MOTIF PROTEIN 49)S.X.H.G.
0.149.3Os08g0492100AK071053.1-Paraneoplastic encephalomyelitis antigen familyprotein5e-8At3g13224RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.094.9Os01g0911100AK062123.1-ATP-dependent RNA helicase-like protein1e-17At5g63120ethylene-responsive DEAD box RNA helicase, putative (RH30)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.498.1GSM159184Y Leaf, biological rep 2GSE6893Expression data for reproductive development in rice
9.397.9GSM154946Leaf_DMSO-treatment_30min_replicate 2GSE6719Cytokinin responsive genes in rice
8.697.8GSM154947Leaf_DMSO-treatment_30min_replicate 3GSE6719Cytokinin responsive genes in rice
8.397.7GSM154945Leaf_DMSO-treatment_30min_replicate 1GSE6719Cytokinin responsive genes in rice
8.297.7GSM154951Leaf_DMSO-treatment_120min_replicate 1GSE6719Cytokinin responsive genes in rice
8.197.7GSM154953Leaf_DMSO-treatment_120min_replicate 3GSE6719Cytokinin responsive genes in rice
8.197.7GSM154952Leaf_DMSO-treatment_120min_replicate 2GSE6719Cytokinin responsive genes in rice
5.696.9GSM375766gid1-3_ shoot_replicate 2GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
5.596.8GSM4094319311_young panicle 2cm, biological rep2GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
5.396.7GSM375767gid1-3_ shoot_replicate 3GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.253e-46188Os11g0523800AK071997.1-Transcriptional factor B3 family protein3e-18At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.172e-44182Os12g0479400AK067061.1-Transcriptional factor B3 family protein3e-11At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.063e-1275Os01g0670800AB071291.1-Transcriptional factor B3 family protein1e-3At2g33860ETT (ETTIN)C.G.S.X.
0.041e-1483Os05g0563400AB071290.1-Auxin response factor 52e-6At2g33860ETT (ETTIN)C.G.S.X.
0.032e-1379Os06g0702600CB621018-Auxin response factor 25e-13At1g19220ARF19 (AUXIN RESPONSE FACTOR 19)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.176e-28127Arabidopsis thalianaAt5g62000836321ARF2 (AUXIN RESPONSE FACTOR 2)Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation.---C.G.S.X.
0.172e-37159Glycine maxGma.2563.1.S1_a_atBQ742867--2e-61At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.600971Hordeum vulgareContig1664_atContig1664--5e-25At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.152e-37159Populus trichocarpaPtpAffx.210693.1.S1_atpmrna20965hypothetical protein-4e-125At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.570975Triticum aestivumTa.2593.2.S1_atBQ169061--1e-25At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.072e-1583Vitis vinifera1611882_atCF512921hypothetical protein LOC100268072-7e-13At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
0.393e-154545Zea maysZm.4931.1.A1_atBM332329hypothetical protein LOC100273501-3e-26At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006417Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA.
LGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
LGO:0009725A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus.
LGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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