CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0922700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0922700 9629.m06891 - Hypothetical protein 7e-2 At1g27760 interferon-related developmental regulator family protein / IFRD protein family S.X. H.G.
0.57 77.0 Os04g0675400 AK068186.1 - Heat shock protein DnaJ family protein 9e-1 At2g28710 zinc finger (C2H2 type) family protein S.X. H.G.
0.40 51.1 Os08g0425200 AK099569.1 - Conserved hypothetical protein 1e-1 At4g11870 unknown protein S.X. H.G.
0.40 51.1 Os01g0784700 AY327041.1 - Receptor-like kinase 2e-6 At4g21380 ARK3 (A. THALIANA RECEPTOR KINASE 3) S.X. H.G.
0.33 38.8 Os02g0774100 9630.m05279 - Thioredoxin-related domain containing protein 4e-3 At5g06690 WCRKC1 (WCRKC THIOREDOXIN 1) S.X. H.G.
0.31 34.5 Os01g0945300 AK065371.1 - Amino acid/polyamine transporter I family protein 7e-17 At2g01170 BAT1 (BIDIRECTIONAL AMINO ACID TRANSPORTER 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
49.3 99.9 GSM207566 Mudanjiang8 wild type control rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
48.6 99.9 GSM207567 Mudanjiang8 wild type control rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
42.6 99.9 GSM207565 Mudanjiang8 wild type control rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
33.1 99.8 GSM207563 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
31.4 99.7 GSM207559 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
29.4 99.7 GSM207562 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
27.4 99.6 GSM207558 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
24.5 99.4 GSM207564 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
23.6 99.4 GSM207560 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
10.0 98.0 GSM154954 Leaf_tZ-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e+0 34 Os04g0213400 9636.m01647 - - 2e+0 At1g06930 unknown protein C.G. S.X.
0.01 6e-1 36 Os01g0723700 9629.m05098 - Transcriptional factor B3 family protein 1e+0 At3g49560 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein C.G. S.X.
0.01 6e-1 36 Os05g0557600 AK121717.1 - Ubiquitin-conjugating enzymes domain containingprotein 3e-4 At3g15355 UBC25 (UBIQUITIN-CONJUGATING ENZYME 25) C.G. S.X.
0.01 2e+0 34 Os07g0153300 AK066146.1 - Protein of unknown function DUF1365 family protein 4e-4 At1g30130 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-2 38 Arabidopsis thaliana At1g27760 839669 interferon-related developmental regulator family protein / IFRD protein family Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress. - - - C.G. S.X.
0.03 2e+0 34 Glycine max Gma.9850.1.S1_at AW311448 - - 5e-6 At5g27820 ribosomal protein L18 family protein C.G. S.X.
0.03 2e+0 32 Hordeum vulgare Contig9698_at Contig9698 - - 3e-1 At4g20390 integral membrane family protein C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.215590.1.S1_at pmrna29872 hypothetical protein - 9e-1 At3g20260 structural constituent of ribosome C.G. S.X.
0.14 3e-4 46 Triticum aestivum TaAffx.54209.1.S1_at CA684449 - - 4e+0 At2g17442 unknown protein C.G. S.X.
0.06 1e+0 32 Vitis vinifera 1618105_at CF414296 - - 2e-2 At4g34550 - C.G. S.X.
0.04 5e-1 34 Zea mays Zm.9648.1.A1_at BM348986 plant-specific domain TIGR01615 family protein - 4e+0 At4g03965 protein binding / zinc ion binding C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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