CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0912700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0912700 AK068528.1 - Conserved hypothetical protein 1e-1 At2g01340 unknown protein S.X. H.G.
0.80 94.6 Os12g0420200 CB652532 - 38 kDa ribosome-associated protein 1e+0 At1g31250 proline-rich family protein S.X. H.G.
0.71 89.6 Os07g0171100 AK066475.1 - TPR-like domain containing protein 2e-16 At1g55480 binding / protein binding S.X. H.G.
0.67 87.2 Os02g0764500 AK066291.1 - Lhca5 protein 8e-3 At1g45474 LHCA5 S.X. H.G.
0.61 81.2 Os08g0162600 AK060121.1 - Rubredoxin-type Fe(Cys)4 protein family protein 6e-22 At5g17170 ENH1 (enhancer of sos3-1) S.X. H.G.
0.50 68.0 Os08g0114100 AK099560.1 - Conserved hypothetical protein 4e-27 At1g64680 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.6 98.1 GSM174888 C mock 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
8.0 97.6 GSM421702 XOO, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.8 97.6 GSM421682 XOC, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.5 97.5 GSM174890 G mock 4 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
7.4 97.5 GSM174883 A mock 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
6.5 97.2 GSM421706 XOO, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.5 97.2 GSM174887 D FR13 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
6.3 97.2 GSM174884 E mock 4 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
6.3 97.2 GSM421726 MOCK, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.3 97.2 GSM421690 XOO, 2 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-5 52 Os04g0380200 AK104769.1 - Conserved hypothetical protein 1e-1 At3g27210 unknown protein C.G. S.X.
0.02 1e-6 56 Os01g0840200 AK069954.1 - HSP20-like chaperone domain containing protein 2e-26 At3g12570 FYD C.G. S.X.
0.02 4e-6 54 Os07g0633600 AK067310.1 - Conserved hypothetical protein 2e-8 At4g08810 SUB1 C.G. S.X.
0.02 2e-5 52 Os09g0329000 9637.m01333 - BURP domain containing protein 1e+0 At1g70370 BURP domain-containing protein / polygalacturonase, putative C.G. S.X.
0.02 6e-5 50 Os07g0202800 9635.m00996 - - 6e-1 At5g52060 ATBAG1 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 1) C.G. S.X.
0.02 6e-5 50 Os10g0508000 9638.m03238 - Multicopper oxidase, type 1 family protein 2e-4 At3g13400 sks13 (SKU5 Similar 13) C.G. S.X.
0.02 6e-5 50 Os12g0177600 9640.m00710 - - 3e+0 At5g11550 binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-1 38 Arabidopsis thaliana At2g01340 814662 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:plasma membrane;PO - - - C.G. S.X.
0.06 2e-7 57 Glycine max Gma.8182.1.S1_a_at CD401769 - - 5e-12 At1g65230 unknown protein C.G. S.X.
0.47 2e-76 286 Hordeum vulgare Contig8260_s_at Contig8260 - - 2e+0 At1g65230 unknown protein C.G. S.X.
0.03 1e-2 42 Populus trichocarpa PtpAffx.201051.1.S1_at pmrna2071 multidrug/pheromone exporter, MDR family, ABC transporter family - 3e-3 At3g49300 proline-rich family protein C.G. S.X.
0.31 7e-53 208 Triticum aestivum TaAffx.122229.1.S1_at BG313852 - - 2e+1 At5g57300 UbiE/COQ5 methyltransferase family protein C.G. S.X.
0.12 3e-9 61 Vitis vinifera 1607753_at CA816321 hypothetical protein LOC100263239 - 1e-6 At1g65230 unknown protein C.G. S.X.
0.18 5e-30 131 Zea mays Zm.12385.1.S1_at BQ578257 hypothetical protein LOC100274490 - 1e+0 At1g61660 basic helix-loop-helix (bHLH) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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