CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0911100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.6 Os01g0911100 AK062123.1 - ATP-dependent RNA helicase-like protein 1e-17 At5g63120 ethylene-responsive DEAD box RNA helicase, putative (RH30) S.X. H.G.
0.22 19.4 Os04g0609600 AK070129.1 - Protein phosphatase type 2C 3e-3 At5g27930 protein phosphatase 2C, putative / PP2C, putative S.X. H.G.
0.22 19.4 Os03g0278300 AK071965.1 - Transcriptional coactivator-like protein 6e-12 At5g02530 RNA and export factor-binding protein, putative S.X. H.G.
0.22 19.4 Os01g0556400 CB657305 - Heat shock protein DnaJ family protein 4e-3 At5g05750 DNAJ heat shock N-terminal domain-containing protein S.X. H.G.
0.11 6.5 Os02g0123200 AK065876.1 - - 1e-1 At2g45690 SSE1 (SHRUNKEN SEED 1) S.X. H.G.
0.10 5.7 Os07g0471000 AB031396.1 - Protein kinase domain containing protein 6e-3 At5g24360 IRE1-1 (INOSITOL REQUIRING 1-1) S.X. H.G.
0.08 4.2 Os01g0121100 AK071475.1 - AR401 6e-1 At3g27230 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.2 97.4 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
6.0 97.0 GSM154955 Leaf_tZ-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
5.9 97.0 GSM154956 Leaf_tZ-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
5.9 97.0 GSM154950 Leaf_tZ-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
5.8 97.0 GSM154949 Leaf_tZ-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
5.4 96.8 GSM154954 Leaf_tZ-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
5.4 96.8 GSM154948 Leaf_tZ-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
5.1 96.6 GSM173091 Rice OsSRT1 RNAi transgenic line LM1 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
4.5 96.3 GSM154953 Leaf_DMSO-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
4.4 96.2 GSM159191 Young inflorescence (P1, upto 3 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.53 0 2506 Os09g0462100 AK068197.1 - - 4e-14 At1g55150 DEAD box RNA helicase, putative (RH20) C.G. S.X.
0.10 4e-68 262 Os06g0263700 CB646222 - Hypothetical protein 2e-7 At5g66190 FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1) C.G. S.X.
0.07 6e-27 125 Os02g0566300 AK073899.1 - Conserved hypothetical protein 5e-1 At1g50760 unknown protein C.G. S.X.
0.04 1e-3 46 Os03g0805200 AK066048.1 - RNA helicase (Fragment) 3e-26 At3g58570 DEAD box RNA helicase, putative C.G. S.X.
0.03 3e-13 79 Os03g0848800 9631.m06249 - - 4e+0 At2g29525 - C.G. S.X.
0.02 8e-8 59 Os01g0172200 AK100326.1 - WW/Rsp5/WWP domain containing protein 1e-7 At3g01540 DRH1 (DEAD BOX RNA HELICASE 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 7e-25 117 Arabidopsis thaliana At5g63120 836432 ethylene-responsive DEAD box RNA helicase, putative (RH30) F:helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding;P:unknown;C:unknown;BMOFPAV - - - C.G. S.X.
0.11 4e-24 115 Glycine max GmaAffx.68580.1.S1_at BI786481 - - 7e-32 At5g63120 ethylene-responsive DEAD box RNA helicase, putative (RH30) C.G. S.X.
0.41 0 1031 Hordeum vulgare Contig658_at Contig658 - - 3e-19 At5g63120 ethylene-responsive DEAD box RNA helicase, putative (RH30) C.G. S.X.
0.18 5e-14 81 Populus trichocarpa PtpAffx.210589.1.S1_at pmrna20764 hypothetical protein - 3e-31 At5g63120 ethylene-responsive DEAD box RNA helicase, putative (RH30) C.G. S.X.
0.43 0 1019 Triticum aestivum Ta.24586.2.S1_a_at BJ212342 - - 9e-22 At5g63120 ethylene-responsive DEAD box RNA helicase, putative (RH30) C.G. S.X.
0.01 1e-5 52 Vitis vinifera 1622644_at CB007566 hypothetical protein LOC100250337 - 6e-172 At2g42520 DEAD box RNA helicase, putative C.G. S.X.
0.37 0 718 Zea mays Zm.17246.1.S1_at AY466159.1 DEAD box RNA helicase1 - 5e-12 At5g63120 ethylene-responsive DEAD box RNA helicase, putative (RH30) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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