CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0897600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.56 76.3 Os01g0897600 CA762923 - Glycoside hydrolase, family 1 protein 2e-7 At5g36890 BGLU42 (BETA GLUCOSIDASE 42) S.X. H.G.
0.53 71.3 Os01g0260800 AK071445.1 - Conserved hypothetical protein 4e-1 At2g19270 - S.X. H.G.
0.46 60.9 Os01g0231800 AK062918.1 - Conserved hypothetical protein 2e+0 At3g16220 - S.X. H.G.
0.36 44.0 Os08g0258200 AK067289.1 - Ankyrin repeat containing protein 2e-5 At5g57740 XBAT32 S.X. H.G.
0.36 44.0 Os02g0187800 AK105011.2 - Cinnamyl-alcohol dehydrogenase (EC 1.1.1.195)(CAD) (Brown-midrib 1 protein) 1e-2 At3g19450 ATCAD4 S.X. H.G.
0.32 36.3 Os04g0650900 AK064480.1 - Alpha-N-acetylglucosaminidase 3e-14 At5g13690 alpha-N-acetylglucosaminidase family / NAGLU family S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
10.7 98.1 GSM262018 Nipponbare, 11 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
9.6 97.9 GSM262007 IAC165, 11 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
9.3 97.9 GSM262014 Nipponbare, 4 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
8.9 97.8 GSM262006 IAC165, 11 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
8.8 97.8 GSM262011 Nipponbare, 2 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
8.0 97.6 GSM149410 Rice Azucena 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
7.7 97.6 GSM262010 Nipponbare, 2 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
7.6 97.5 GSM262019 Nipponbare, 11 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
7.4 97.5 GSM149412 Rice Bala 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
6.7 97.3 GSM262015 Nipponbare, 4 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 3e-14 81 Os10g0365900 9638.m01861 - - 6e+0 At3g20070 TTN9 (TITAN9) C.G. S.X.
0.02 2e-6 56 Os09g0511700 AK101420.1 - Glycoside hydrolase, family 1 protein 4e-3 At1g02850 BGLU11 (BETA GLUCOSIDASE 11) C.G. S.X.
0.02 5e-4 48 Os03g0703000 AK103027.1 - Beta-glucosidase 2e-2 At3g18070 BGLU43 (BETA GLUCOSIDASE 43) C.G. S.X.
0.02 5e-4 48 Os05g0342000 9633.m02510 - Wound-induced WI12 family protein 2e-2 At2g21060 ATGRP2B (GLYCINE-RICH PROTEIN 2B) C.G. S.X.
0.02 2e-3 46 Os11g0224350 9639.m01097 - - 8e-1 At4g19270 unknown protein C.G. S.X.
0.01 5e-4 48 Os09g0511900 AK066336.1 - Glycoside hydrolase, family 1 protein 1e-2 At1g02850 BGLU11 (BETA GLUCOSIDASE 11) C.G. S.X.
0.01 2e-3 46 Os03g0236900 9631.m01267 - Anaphase promoting complex/cyclosome subunit 3e-13 At1g78770 cell division cycle family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 2e-7 57 Arabidopsis thaliana At5g36890 833656 BGLU42 (BETA GLUCOSIDASE 42) F:cation binding, beta-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:cellulose catabolic process, carbohydrate metabolic process;C:unknown;BOPMFA - - - C.G. S.X.
0.14 6e-12 73 Glycine max GmaAffx.59853.1.S1_at BQ612438 - - 2e-7 At5g36890 BGLU42 (BETA GLUCOSIDASE 42) C.G. S.X.
0.12 1e-44 180 Hordeum vulgare Contig16567_at Contig16567 - - 7e-3 At5g42260 BGLU12 (BETA GLUCOSIDASE 12) C.G. S.X.
0.10 9e-8 59 Populus trichocarpa PtpAffx.32431.1.S1_at CA926237 hypothetical protein - 2e-30 At5g36890 BGLU42 (BETA GLUCOSIDASE 42) C.G. S.X.
0.47 4e-111 402 Triticum aestivum Ta.5589.2.S1_a_at CK152863 - - 2e-8 At5g36890 BGLU42 (BETA GLUCOSIDASE 42) C.G. S.X.
0.06 7e-8 57 Vitis vinifera 1620058_at CF212797 hypothetical protein LOC100241205 /// hypothetical protein LOC100258610 - 1e-3 At5g36890 BGLU42 (BETA GLUCOSIDASE 42) C.G. S.X.
0.47 4e-152 537 Zea mays Zm.6844.1.S1_at AI065453 hypothetical protein LOC100280071 - 4e-8 At5g36890 BGLU42 (BETA GLUCOSIDASE 42) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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