CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0883000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.87 96.6 Os01g0883000 9629.m06547 - Protein kinase domain containing protein 7e-8 At2g48010 RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3) S.X. H.G.
0.76 92.2 Os01g0862400 AK108182.1 - Conserved hypothetical protein 3e+0 At3g52290 IQD3 (IQ-domain 3) S.X. H.G.
0.60 79.7 Os12g0290400 9640.m01909 - - 3e+0 At5g43150 unknown protein S.X. H.G.
0.54 71.9 Os12g0290300 9640.m01908 - Fe-S metabolism associated SufE family protein 4e-1 At1g78410 VQ motif-containing protein S.X. H.G.
0.53 71.3 Os05g0506100 9633.m03998 - Protein of unknown function DUF569 family protein 5e-1 At3g61470 LHCA2 S.X. H.G.
0.47 62.3 Os06g0257300 9634.m01455 - - 4e-1 At1g08480 unknown protein S.X. H.G.
0.45 58.8 Os02g0242100 9630.m01355 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 1e-5 At5g26310 UGT72E3 S.X. H.G.
0.45 58.8 Os11g0526601 9639.m02939 - - 1e+0 At4g18100 60S ribosomal protein L32 (RPL32A) S.X. H.G.
0.43 55.4 Os08g0202500 AK108353.1 - Conserved hypothetical protein 5e+0 At5g28490 LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1) S.X. H.G.
0.39 48.3 Os01g0230100 9629.m01267 - - 7e+0 At5g55570 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
144.4 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
22.1 99.3 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.5 99.2 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.2 99.1 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.5 99.1 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.9 99.0 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.6 98.9 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.5 98.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
15.0 98.6 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.1 98.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.45 2e-95 351 Os05g0423500 AK066000.1 - Protein kinase domain containing protein 3e-10 At2g48010 RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3) C.G. S.X.
0.03 1e-10 69 Os08g0376300 AK072348.1 - Protein kinase domain containing protein 4e-7 At3g13065 SRF4 (STRUBBELIG-RECEPTOR FAMILY 4) C.G. S.X.
0.03 2e-9 65 Os01g0670100 AK101461.1 - Protein kinase domain containing protein 3e-1 At5g63280 zinc finger (C2H2 type) family protein C.G. S.X.
0.02 2e-12 75 Os12g0210400 AK068774.1 - Protein kinase domain containing protein 7e-3 At5g49780 ATP binding / kinase/ protein serine/threonine kinase C.G. S.X.
0.02 4e-11 71 Os09g0423200 9637.m02208 - Protein kinase domain containing protein 3e-2 At3g19700 IKU2 (HAIKU2) C.G. S.X.
0.02 5e-10 67 Os02g0648100 AK111267.1 - Protein kinase domain containing protein 1e-2 At3g13065 SRF4 (STRUBBELIG-RECEPTOR FAMILY 4) C.G. S.X.
0.02 2e-9 65 Os02g0623600 AK111596.1 - Protein kinase domain containing protein 3e-4 At1g48210 serine/threonine protein kinase, putative C.G. S.X.
0.01 5e-10 67 Os08g0493800 AK110374.1 - Protein kinase domain containing protein 2e-3 At5g56040 leucine-rich repeat protein kinase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-8 59 Arabidopsis thaliana At2g48010 819413 RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3) receptor-like serine/threonine kinase (RKF3) - - - C.G. S.X.
0.03 2e-2 42 Glycine max GmaAffx.92535.1.S1_at CF808260 - - 6e-2 At1g26970 protein kinase, putative C.G. S.X.
0.04 2e-6 54 Hordeum vulgare Contig12629_s_at Contig12629 - - 6e-4 At1g16110 WAKL6 (wall associated kinase-like 6) C.G. S.X.
0.02 3e-1 38 Populus trichocarpa Ptp.270.1.A1_at CK087925 hypothetical protein - 8e-9 At5g48740 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
0.17 8e-23 109 Triticum aestivum TaAffx.84014.1.S1_at CA646297 - - 7e-2 At5g47070 protein kinase, putative C.G. S.X.
0.03 5e-9 61 Vitis vinifera 1616189_at CF511570 hypothetical protein LOC100260741 - 6e-18 At1g75820 CLV1 (CLAVATA 1) C.G. S.X.
0.06 3e-11 69 Zea mays Zm.1140.1.S1_at BM073428 hypothetical protein LOC100279272 - 4e-14 At3g49670 BAM2 (BARELY ANY MERISTEM 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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