CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0873000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0873000 NM_190814.1 - Homeodomain-like containing protein 2e+0 At4g34970 ADF9 (ACTIN DEPOLYMERIZING FACTOR 9) S.X. H.G.
0.03 1.4 Os06g0107200 AK108791.1 - Hypothetical protein 3e+0 At5g48020 unknown protein S.X. H.G.
0.02 1.0 Os04g0554900 9632.m04518 - - 8e-1 At2g32890 RALFL17 (RALF-LIKE 17) S.X. H.G.
0.01 0.5 Os02g0743300 9630.m04995 - - 3e+0 At1g66235 unknown protein S.X. H.G.
0.01 0.5 Os10g0540400 9638.m03569 - - 2e-1 At4g21720 unknown protein S.X. H.G.
0.01 0.5 Os05g0544000 9633.m04384 - - 2e+0 At2g05260 lipase class 3 family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
50.5 99.9 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
41.6 99.9 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
40.2 99.9 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
38.8 99.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
35.2 99.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
34.7 99.8 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
33.8 99.8 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.0 99.6 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.2 99.2 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.2 98.8 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 2e-11 71 Os07g0603000 9635.m04118 - - 9e+0 At4g28050 TET7 (TETRASPANIN7) C.G. S.X.
0.07 7e-11 69 Os09g0241700 AK065944.1 - Protein of unknown function DUF635 family protein 5e-1 At3g56770 basic helix-loop-helix (bHLH) family protein C.G. S.X.
0.03 3e-4 48 Os11g0282700 AK103644.1 - Homeodomain-like containing protein 8e-1 At5g02570 histone H2B, putative C.G. S.X.
0.02 2e-1 38 Os04g0437000 9632.m03435 - No apical meristem (NAM) protein domain containingprotein 4e-1 At5g64530 XND1 C.G. S.X.
0.01 1e+0 36 Os01g0804200 9629.m05792 - Cytochrome P450 family protein 2e-1 At3g56630 CYP94D2 C.G. S.X.
0.01 1e+0 36 Os11g0438700 AK073524.1 - Glucose/ribitol dehydrogenase family protein 3e-1 At3g13000 transcription factor C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At4g34970 829649 ADF9 (ACTIN DEPOLYMERIZING FACTOR 9) F:actin binding;P:biological_process unknown;C:intracellular;MPOF - - - C.G. S.X.
0.03 4e-2 40 Glycine max GmaAffx.76424.1.S1_at BE609367 - - 4e+0 At5g52470 FIB1 (FIBRILLARIN 1) C.G. S.X.
0.58 8e-66 250 Hordeum vulgare Contig19528_at Contig19528 - - 2e+0 At5g40260 nodulin MtN3 family protein C.G. S.X.
0.03 4e-2 40 Populus trichocarpa PtpAffx.203226.1.S1_at pmrna6394 hypothetical protein - 4e-15 At3g09370 MYB3R-3 (myb domain protein 3R-3) C.G. S.X.
0.17 5e-32 139 Triticum aestivum TaAffx.128418.45.A1_at BJ229052 - - 4e+0 At5g15360 unknown protein C.G. S.X.
0.04 6e-1 34 Vitis vinifera 1620370_at CF204708.1 - - 5e+0 At1g02710 glycine-rich protein C.G. S.X.
0.02 1e+1 30 Zea mays ZmAffx.937.1.S1_at AI820257 - - 8e+0 At4g19620 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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