CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0872600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.6 Os01g0872600 AK060248.1 - Hypothetical protein 6e-2 At1g72125 transporter S.X. H.G.
0.73 91.1 Os04g0354600 AK065894.1 - Male sterility protein family protein 4e+0 At1g35333 unknown protein S.X. H.G.
0.73 91.1 Os03g0832800 AK062843.1 - Phospholipid/glycerol acyltransferase familyprotein 4e-2 At4g00400 GPAT8 (glycerol-3-phosphate acyltransferase 8) S.X. H.G.
0.67 87.2 Os04g0353600 CB641510 - Male sterility protein family protein 2e+0 At1g35333 unknown protein S.X. H.G.
0.67 87.2 Os05g0215000 AK119543.1 - BURP domain containing protein 1e+1 At3g20600 NDR1 (non race-specific disease resistance 1) S.X. H.G.
0.56 76.3 Os06g0149100 AK099064.1 - Lipolytic enzyme, G-D-S-L family protein 3e+0 At5g22810 GDSL-motif lipase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
14.2 98.5 GSM421718 MOCK, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.6 98.2 GSM421714 MOCK, 4 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.1 97.9 GSM421726 MOCK, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.9 97.6 GSM421674 XOC, 4 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.5 97.5 GSM421705 XOO, 96 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.1 97.4 GSM421683 XOC, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.0 97.4 GSM421685 XOC, 96 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.0 97.4 GSM421703 XOO, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.0 97.4 GSM421682 XOC, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.5 97.2 GSM421704 XOO, 96 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.17 1e-26 123 Os01g0872500 BM419009 - Oligopeptide transporter-like protein 2e+0 At3g21270 ADOF2 C.G. S.X.
0.11 2e-18 95 Os01g0871500 AK068840.1 - TGF-beta receptor, type I/II extracellular regionfamily protein 6e-2 At1g72125 transporter C.G. S.X.
0.10 9e-18 93 Os05g0430900 AK068274.1 - TGF-beta receptor, type I/II extracellular regionfamily protein 1e-3 At1g72120 transporter C.G. S.X.
0.08 6e-16 87 Os01g0871600 AK103248.1 - TGF-beta receptor, type I/II extracellular regionfamily protein 2e-1 At5g07730 unknown protein C.G. S.X.
0.06 2e-16 89 Os05g0431900 9633.m03323 - Conserved hypothetical protein 3e+0 At3g50670 U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K) C.G. S.X.
0.03 4e-11 71 Os01g0871400 AK068758.1 - Hypothetical protein 2e+0 At3g01516 unknown protein C.G. S.X.
0.03 1e-4 50 Os10g0109700 9638.m00111 - - 5e-2 At1g68570 proton-dependent oligopeptide transport (POT) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 6e-2 40 Arabidopsis thaliana At1g72125 6241212 transporter F:transporter activity;P:oligopeptide transport;C:membrane;BPOMF - - - C.G. S.X.
0.01 1e+0 36 Glycine max Gma.9721.1.S1_at CA936082 - - 1e+0 At5g21910 unknown protein C.G. S.X.
0.11 2e-12 73 Hordeum vulgare Contig20479_at Contig20479 - - 1e+0 At1g22540 proton-dependent oligopeptide transport (POT) family protein C.G. S.X.
0.02 3e-1 38 Populus trichocarpa PtpAffx.204434.1.S1_at pmrna8711 hypothetical protein - 2e-8 At5g20935 unknown protein C.G. S.X.
0.28 4e-65 250 Triticum aestivum TaAffx.11044.1.S1_at BJ231669 - - 4e-5 At1g22540 proton-dependent oligopeptide transport (POT) family protein C.G. S.X.
0.03 1e+0 34 Vitis vinifera 1622068_at CA816776 hypothetical protein LOC100252985 - 7e-3 At3g50780 - C.G. S.X.
0.02 7e-3 42 Zea mays Zm.2788.1.S1_at CO520019 hypothetical protein LOC100192469 - 4e-3 At3g54140 PTR1 (PEPTIDE TRANSPORTER 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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