CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0868900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.59 78.0 Os01g0868900 AK099470.1 - Proteinase inhibitor I9, subtilisin propeptidedomain containing protein 8e-2 At5g67360 ARA12 S.X. H.G.
0.88 96.8 Os10g0551700 AK107851.1 - Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein 7e-3 At2g35960 NHL12 S.X. H.G.
0.77 93.1 Os07g0565800 AK062834.1 - Conserved hypothetical protein 2e+0 At3g25577 unknown protein S.X. H.G.
0.71 89.6 Os01g0753800 AK121555.1 - Conserved hypothetical protein 3e+0 At5g47640 NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2) S.X. H.G.
0.59 78.0 Os01g0814100 AK061173.1 - Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein 5e-1 At2g14170 ALDH6B2 S.X. H.G.
0.57 77.0 Os01g0952000 AK099691.1 - Rhicadhesin receptor precursor (Germin-likeprotein) 2e-3 At3g62020 GLP10 (GERMIN-LIKE PROTEIN 10) S.X. H.G.
0.57 77.0 Os02g0816200 AK060243.1 - Lipolytic enzyme, G-D-S-L family protein 2e-4 At3g04290 LTL1 (LI-TOLERANT LIPASE 1) S.X. H.G.
0.55 73.7 Os01g0652000 NM_192389.1 - - 1e-3 At4g18570 proline-rich family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
20.4 99.1 GSM99860 TCHW P3_m103 control, biological rep3 GSE4438 Expression data from rice under salinity stress
17.7 98.9 GSM159201 Inflorescence (P5, 15 - 22 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
16.1 98.7 GSM99858 TCHW P1_m103 control, biological rep1 GSE4438 Expression data from rice under salinity stress
15.6 98.7 GSM159203 Inflorescence (P5, 15 - 22 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
13.3 98.4 GSM159202 Inflorescence (P5, 15 - 22 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
12.6 98.4 GSM99881 TCHW P23_ir29 salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
11.6 98.2 GSM99870 TCHW P13_agami control, biological rep1 GSE4438 Expression data from rice under salinity stress
11.6 98.2 GSM99859 TCHW P2_m103 control, biological rep2 GSE4438 Expression data from rice under salinity stress
9.0 97.8 GSM67060 IR29 salt stressed replicate 1 GSE3053 Rice salt expression
8.7 97.8 GSM67058 IR29 control replicate 1 GSE3053 Rice salt expression
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.50 6e-69 264 Os05g0435800 AK067138.1 - Subtilisin-like protease 8e-2 At3g14067 subtilase family protein C.G. S.X.
0.15 1e-8 63 Os01g0868800 9629.m06426 - - 5e+0 At1g68670 myb family transcription factor C.G. S.X.
0.13 1e-23 113 Os04g0430700 AK105112.1 - Proteinase inhibitor I9, subtilisin propeptidedomain containing protein 1e+0 At3g15356 legume lectin family protein C.G. S.X.
0.11 1e-11 73 Os03g0761500 AK101646.1 - Cucumisin-like serine protease (Putativesubtilisin serine protease ARA12) 4e-4 At5g67360 ARA12 C.G. S.X.
0.11 3e-6 56 Os03g0605300 AK105749.1 - Subtilisin-like protease (Fragment) 8e-2 At5g67360 ARA12 C.G. S.X.
0.04 2e-7 59 Os02g0198700 AK120287.1 - Subtilisin-like protease 2e-5 At2g04160 AIR3 C.G. S.X.
0.04 3e-6 56 Os03g0158700 AK071242.1 - - 9e+0 At4g24060 Dof-type zinc finger domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e-2 40 Arabidopsis thaliana At5g67360 836871 ARA12 Encodes a subtilisin-like serine protease essential for mucilage release from seed coats. - - - C.G. S.X.
0.01 1e-1 40 Glycine max GmaAffx.64888.1.S1_at BQ094211 - - 8e-1 At1g34000 OHP2 (ONE-HELIX PROTEIN 2) C.G. S.X.
0.08 6e-4 46 Hordeum vulgare Contig2147_at Contig2147 - - 4e+0 At5g59810 SBT5.4 C.G. S.X.
0.02 3e-2 42 Populus trichocarpa PtpAffx.127968.1.A1_at CV237300 hypothetical protein - 1e-1 At5g26622 beta-galactosidase C.G. S.X.
0.08 2e-8 61 Triticum aestivum TaAffx.130775.1.S1_at BJ284851 - - 2e+1 Atmg00900 - C.G. S.X.
0.01 2e+0 34 Vitis vinifera 1618849_at BQ799201 hypothetical LOC100250089 - 3e-1 At5g63830 - C.G. S.X.
0.07 7e-19 95 Zea mays Zm.14344.1.A1_at CO529314 subtilisin-like protease - 2e-7 At3g14067 subtilase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006508 The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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