CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0855200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.72 89.8 Os01g0855200 AK066597.1 - TPR-like domain containing protein 8e-2 At5g56840 DNA-binding family protein S.X. H.G.
0.67 87.2 Os07g0142900 AK064848.1 - Aldo/keto reductase family protein 2e-16 At1g06690 aldo/keto reductase family protein S.X. H.G.
0.64 83.4 Os02g0704000 AK064824.1 - Zeaxanthin cleavage oxygenase 4e+0 At4g19170 NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4) S.X. H.G.
0.50 68.0 Os01g0810300 U37936.1 - Calmodulin-like protein 4e-20 At3g43810 CAM7 (CALMODULIN 7) S.X. H.G.
0.47 62.3 Os07g0476900 AK066045.1 - Thioredoxin-related domain containing protein 1e-1 At1g76080 CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD) S.X. H.G.
0.38 46.9 Os11g0130200 AK059458.1 - Protein of unknown function DUF309 domaincontaining protein 8e-3 At2g28790 osmotin-like protein, putative S.X. H.G.
0.33 38.8 Os01g0279700 AK067683.1 - Major facilitator superfamily protein 2e-48 At4g00370 ANTR2 S.X. H.G.
0.29 31.1 Os04g0448900 AB050884.1 - Zeaxanthin epoxidase 9e-11 At5g67030 ABA1 (ABA DEFICIENT 1) S.X. H.G.
0.29 31.1 Os04g0423600 AK065331.1 - Nuclear protein SET domain containing protein 8e+0 At5g15948 CPuORF10 (Conserved peptide upstream open reading frame 10) S.X. H.G.
0.24 22.4 Os09g0541000 AK104786.1 - - 1e-5 At2g37170 PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.6 98.5 GSM421688 XOO, 2 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.6 98.1 GSM421692 XOO, 4 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.1 98.0 GSM159181 Mature leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
9.6 97.9 GSM421696 XOO, 8 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.1 97.9 GSM154956 Leaf_tZ-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
8.9 97.8 GSM154955 Leaf_tZ-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
8.8 97.8 GSM421671 XOC, 4 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.7 97.8 GSM421668 XOC, 2 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.6 97.8 GSM154954 Leaf_tZ-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
8.1 97.7 GSM421704 XOO, 96 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.29 6e-69 264 Os05g0447700 AK071331.1 - Ferritin/ribonucleotide reductase-like familyprotein 2e-5 At1g07280 binding C.G. S.X.
0.01 3e-3 46 Os01g0924200 AK071017.1 - Conserved hypothetical protein 3e+0 At5g15581 unknown protein C.G. S.X.
0.01 3e-3 46 Os05g0215600 AK066642.1 - Conserved hypothetical protein 1e-8 At2g46220 unknown protein C.G. S.X.
0.01 3e-3 46 Os12g0104200 9639.m00032 - Hypothetical protein 3e-3 At1g76010 nucleic acid binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 8e-2 40 Arabidopsis thaliana At5g56840 835786 DNA-binding family protein F:transcription factor activity, DNA binding, nucleic acid binding;P:regulation of transcription;C:unknown;PO - - - C.G. S.X.
0.02 5e-4 48 Glycine max GmaAffx.57621.1.S1_at BQ296739 - - 8e-3 At2g29670 binding C.G. S.X.
0.13 7e-53 208 Hordeum vulgare Contig12267_at Contig12267 - - 4e-1 At5g41720 - C.G. S.X.
0.01 7e-3 44 Populus trichocarpa PtpAffx.205656.1.S1_at pmrna11169 hypothetical protein - 1e-2 At4g15790 unknown protein C.G. S.X.
0.07 2e-9 65 Triticum aestivum TaAffx.57305.1.S1_at CA632267 - - 4e+0 At4g37240 unknown protein C.G. S.X.
0.02 4e-4 46 Vitis vinifera 1614374_s_at CB978592 similar to binding - 2e-8 At2g29670 binding C.G. S.X.
0.02 9e-3 42 Zea mays Zm.12821.1.A1_at CA398688 - - 1e+1 At5g47320 RPS19 (RIBOSOMAL PROTEIN S19) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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