CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0839000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.55 73.7 Os01g0839000 NM_190518.1 - - 3e-1 At2g26120 glycine-rich protein S.X. H.G.
0.60 79.7 Os03g0279100 9631.m01676 - - 2e+0 At5g57290 60S acidic ribosomal protein P3 (RPP3B) S.X. H.G.
0.55 73.7 Os11g0595400 9639.m03473 - - 3e+0 At5g52730 heavy-metal-associated domain-containing protein S.X. H.G.
0.46 60.9 Os01g0831800 9629.m06059 - - 6e+0 At4g32208 - S.X. H.G.
0.44 58.1 Os01g0357000 AK111025.1 - Flavin monoxygenase-like protein floozy 3e-1 At1g63290 ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative S.X. H.G.
0.44 58.1 Os04g0407400 9632.m03191 - - 4e+0 At5g19570 unknown protein S.X. H.G.
0.40 51.1 Os01g0604600 AU058134 - Conserved hypothetical protein 3e+0 At3g48675 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
36.8 99.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
34.4 99.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.0 99.7 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.2 99.7 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.4 99.6 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.2 99.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.5 99.4 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.0 99.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.4 99.2 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.0 99.2 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 1e-41 171 Os12g0629700 AK099946.1 - Thaumatin-like protein precursor 4e-1 At4g31460 ribosomal protein L28 family protein C.G. S.X.
0.15 8e-37 155 Os12g0630100 AK069182.1 - Thaumatin-like protein precursor 1e-1 At4g31460 ribosomal protein L28 family protein C.G. S.X.
0.15 5e-29 129 Os12g0628600 AT003452 - Thaumatin-like protein precursor 6e+0 At3g25400 - C.G. S.X.
0.11 2e-49 196 Os01g0740700 AK109635.1 - - 5e-3 At2g38280 FAC1 (EMBRYONIC FACTOR1) C.G. S.X.
0.11 9e-19 93 Os07g0202800 9635.m00996 - - 6e-1 At5g52060 ATBAG1 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 1) C.G. S.X.
0.11 8e-10 63 Os11g0696000 AK066501.1 - Conserved hypothetical protein 3e+1 At4g39745 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.10 2e-7 56 Os05g0113200 AK110680.1 - Hypothetical protein 7e+0 At2g20784 unknown protein C.G. S.X.
0.09 9e-49 194 Os04g0479500 AK105430.1 - Cyclin-like F-box domain containing protein 4e+0 At5g50090 unknown protein C.G. S.X.
0.09 1e-24 113 Os02g0791800 AY445625.1 - WD40-like domain containing protein 2e-5 At4g30510 AtATG18b C.G. S.X.
0.08 2e-22 107 Os11g0623700 AK063799.1 - Conserved hypothetical protein 2e+0 At3g48100 ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-1 36 Arabidopsis thaliana At2g26120 817152 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM - - - C.G. S.X.
0.05 9e-2 38 Glycine max GmaAffx.83599.2.S1_at CA936809 - - 6e-11 At1g55110 AtIDD7 (Arabidopsis thaliana Indeterminate(ID)-Domain 7) C.G. S.X.
0.05 3e-2 38 Hordeum vulgare Contig4054_s_at Contig4054 pathogenesis-related protein - 9e-2 At1g64185 lactoylglutathione lyase family protein / glyoxalase I family protein C.G. S.X.
0.05 9e-2 38 Populus trichocarpa PtpAffx.106312.1.A1_at DN487543 - - 1e-1 At1g75430 BLH11 (BEL1-LIKE HOMEODOMAIN 11) C.G. S.X.
0.06 4e-3 42 Triticum aestivum TaAffx.106304.1.S1_at CA720557 - - 1e+1 At3g26561 unknown protein C.G. S.X.
0.04 3e-1 34 Vitis vinifera 1621202_at BQ792918 hypothetical protein LOC100267221 - 2e-11 At3g54390 transcription factor C.G. S.X.
0.04 3e-5 48 Zea mays Zm.6659.1.A1_at BM075306 pathogenesis related protein-5 - 6e-1 At1g32763 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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