Gene omics information

Query gene ID	Os01g0835500
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.60	79.7	Os01g0835500	AK066013.1	-	Respiratory burst oxidase homolog	7e-12	At5g60010	FAD binding / calcium ion binding / electron carrier/ iron ion binding / oxidoreductase/ oxidoreductase, acting on NADH or NADPH, with oxygen as acceptor / peroxidase/ superoxide-generating NADPH oxidase	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.17	12.6	Os03g0231800	AK065032.1	-	XF1 protein (Squalene monooxygenase, putative)	1e-18	At4g37760	SQE3 (squalene epoxidase 3)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.16	11.3	Os02g0822100	AK065330.1	-	Arsenical pump membrane protein family protein	1e-3	At1g02260	transmembrane protein, putative	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.12	7.2	Os07g0662900	BM418612	-	4-alpha-glucanotransferase (EC 2.4.1.25)	3e-51	At2g40840	DPE2 (DISPROPORTIONATING ENZYME 2)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.11	6.5	Os05g0588300	AK060360.1	-	Protein kinase domain containing protein	2e+0	At1g53620	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.10	5.7	Os09g0503100	AK108272.1	-	Zinc-containing alcohol dehydrogenase superfamilyprotein	9e+0	At5g23260	TT16 (TRANSPARENT TESTA16)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.8	97.6	GSM421698	XOO, 8 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.3	97.5	GSM195227	Anther	GSE7951	Genome-wide gene expression profiling of rice stigma
6.9	97.3	GSM421692	XOO, 4 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.6	97.3	GSM421678	XOC, 8 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.4	97.2	GSM421706	XOO, 96 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.3	97.2	GSM421726	MOCK, 96 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
5.6	96.9	GSM421686	XOC, 96 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
5.3	96.7	GSM195220	stigma 3, biological rep 2	GSE7951	Genome-wide gene expression profiling of rice stigma
5.2	96.7	GSM421724	MOCK, 96 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
5.0	96.6	GSM421696	XOO, 8 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.53	0	791	Os05g0465800	AK072353.1	-	Cytochrome b-245, heavy chain family protein	1e-16	At5g60010	FAD binding / calcium ion binding / electron carrier/ iron ion binding / oxidoreductase/ oxidoreductase, acting on NADH or NADPH, with oxygen as acceptor / peroxidase/ superoxide-generating NADPH oxidase	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.23	0	1820	Os01g0835600	AK064796.1	-	HMG-I and HMG-Y, DNA-binding domain containingprotein	2e-4	At1g64060	ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.09	1e-33	147	Os04g0375500	9632.m02910	-	-	1e+1	At5g16480	tyrosine specific protein phosphatase family protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	7e-12	73	Arabidopsis thaliana	At5g60010	836123	FAD binding / calcium ion binding / electron carrier/ iron ion binding / oxidoreductase/ oxidoreductase, acting on NADH or NADPH, with oxygen as acceptor / peroxidase/ superoxide-generating NADPH oxidase	F:in 8 functions;P:oxidation reduction;C:integral to membrane, membrane;MPFOB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	2e-13	79	Glycine max	Gma.18084.1.S1_at	BI317557	-	-	2e-2	At1g09090	ATRBOHB (respiratory burst oxidase homolog B)	C.G.	S.X.	Please select
0.53	0	1552	Hordeum vulgare	Contig7197_at	Contig7197	-	-	5e-15	At3g45810	ferric reductase-like transmembrane component family protein	C.G.	S.X.	Please select
0.11	2e-12	75	Populus trichocarpa	PtpAffx.206303.1.S1_at	pmrna12504	hypothetical protein	-	9e-14	At3g45810	ferric reductase-like transmembrane component family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.23	3e-48	194	Triticum aestivum	TaAffx.12570.1.S1_at	BJ253637	-	-	8e-3	At4g11230	respiratory burst oxidase, putative / NADPH oxidase, putative	C.G.	S.X.	Please select
0.01	2e+0	34	Vitis vinifera	1621170_at	CB004090	hypothetical protein LOC100255274	-	2e-2	At3g04760	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select
0.54	0	668	Zea mays	Zm.4257.1.S1_at	AW076388	respiratory burst oxidase protein A	-	5e-12	At1g64060	ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F)	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name
C	GO:0022900	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage