CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0834300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.58 77.0 Os01g0834300 NM_190471.1 - - 1e-1 At2g26270 unknown protein S.X. H.G.
0.70 88.4 Os06g0476000 9634.m02689 - - 3e+0 At3g17090 protein phosphatase 2C family protein / PP2C family protein S.X. H.G.
0.67 87.2 Os02g0215900 AK064556.1 - Receptor kinase-like protein 7e-5 At5g20480 EFR (EF-TU RECEPTOR) S.X. H.G.
0.46 60.9 Os04g0651601 9632.m05429 - - 3e-1 At5g40950 RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27) S.X. H.G.
0.44 58.1 Os08g0527900 9636.m04228 - Peptidase C19, ubiquitin carboxyl-terminalhydrolase 2 family protein 3e-1 At3g49540 unknown protein S.X. H.G.
0.43 55.4 Os07g0412000 NM_187825.1 - - 6e-1 At5g10390 histone H3 S.X. H.G.
0.38 46.9 Os02g0590700 AK100917.1 - Conserved hypothetical protein 4e-2 At3g20860 ATNEK5 (NIMA-RELATED KINASE5) S.X. H.G.
0.35 41.7 Os10g0571900 NM_197841.1 - RmlC-like cupin family protein 3e+0 At2g13980 nucleic acid binding S.X. H.G.
0.32 36.3 Os05g0125400 9633.m00272 - Receptor protein kinase-like protein 4e-2 At3g07070 protein kinase family protein S.X. H.G.
0.31 34.5 Os05g0234700 9632.m01094 - HAT dimerisation domain containing protein 6e-2 At4g09660 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
46.4 99.9 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
44.7 99.9 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
33.0 99.8 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.1 99.7 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.3 99.6 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.7 99.6 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.7 99.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.5 99.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.8 99.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.2 99.3 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 5e+0 34 Os02g0625900 9630.m03974 - Conserved hypothetical protein 4e+0 At5g47130 Bax inhibitor-1 family / BI-1 family C.G. S.X.
0.01 5e+0 34 Os05g0210600 AK104996.2 - TPR-like domain containing protein 4e+0 At4g14365 zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein C.G. S.X.
0.01 5e+0 34 Os07g0246200 AK065341.1 - Calreticulin (Fragment) 1e-107 At1g56340 CRT1 (CALRETICULIN 1) C.G. S.X.
0.01 5e+0 34 Os08g0492100 AK071053.1 - Paraneoplastic encephalomyelitis antigen familyprotein 5e-8 At3g13224 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.01 5e+0 34 Os11g0633500 AK066215.1 - NBS-LRR disease resistance protein homologue(Fragment) 2e+0 At2g16070 PDV2 (PLASTID DIVISION2) C.G. S.X.
0.01 5e+0 34 Os12g0299300 CA753251 - - 2e-1 At3g50580 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e-1 38 Arabidopsis thaliana At2g26270 817167 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.02 3e+0 34 Glycine max HgAffx.21307.1.A1_at CK350397 - - 8e-1 Atmg01000 - C.G. S.X.
0.02 1e+0 34 Hordeum vulgare EBro07_SQ002_B11_at EBro07_SQ002_B11 - - 3e+0 At3g56380 ARR17 (ARABIDOPSIS RESPONSE REGULATOR 17) C.G. S.X.
0.02 8e-1 36 Populus trichocarpa PtpAffx.118999.1.S1_at DN497310 hypothetical protein - 5e+0 At1g43610 NLI interacting factor (NIF) family protein C.G. S.X.
0.02 9e+0 32 Triticum aestivum TaAffx.77621.1.S1_s_at CA745220 - - 4e+0 At4g04900 RIC10 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 10) C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1619825_at CB969232 - - 2e+0 At1g47750 PEX11A (PEROXIN 11A) C.G. S.X.
0.02 4e+0 32 Zea mays ZmAffx.161.1.A1_at AI668163 hypothetical protein LOC100193378 - 3e+0 At4g17560 ribosomal protein L19 family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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