CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0829000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.6 Os01g0829000 AK065327.1 - Conserved hypothetical protein 7e-1 At5g43410 ethylene-responsive factor, putative S.X. H.G.
0.92 99.1 Os07g0510100 AK066776.1 - Methionine aminopeptidase-like protein 3e-19 At1g13270 MAP1C (METHIONINE AMINOPEPTIDASE 1B) S.X. H.G.
0.61 81.2 Os03g0736400 AK105812.1 - Conserved hypothetical protein 95 family protein 1e-24 At3g28460 unknown protein S.X. H.G.
0.57 77.0 Os01g0618400 NM_192814.1 - RNA helicase (Fragment) 2e-20 At5g63630 DEAD box RNA helicase, putative S.X. H.G.
0.50 68.0 Os08g0345400 AK065348.1 - Conserved hypothetical protein 1e-2 At2g04360 unknown protein S.X. H.G.
0.46 60.9 Os01g0306800 AK099426.1 - Conserved hypothetical protein 9e-1 At5g42370 unknown protein S.X. H.G.
0.44 58.1 Os01g0558800 AK068120.1 - Conserved hypothetical protein 8e-1 At5g19300 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
23.2 99.3 GSM207562 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
17.4 98.9 GSM207564 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
17.4 98.9 GSM207563 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
16.6 98.8 GSM207559 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
16.0 98.7 GSM207558 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
14.7 98.6 GSM357137 14-day-old seedling, heat shock, rep 3 GSE14275 Expression data for heat shock in rice seedlings
14.4 98.6 GSM207560 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
13.8 98.5 GSM357136 14-day-old seedling, heat shock, rep 2 GSE14275 Expression data for heat shock in rice seedlings
12.2 98.3 GSM357135 14-day-old seedling, heat shock, rep 1 GSE14275 Expression data for heat shock in rice seedlings
10.0 98.0 GSM267999 Green leaves in F9G RILs from parents lines GSE10872 Molecular characterization and genetic analysis reveal SA0420 as an early senescing rice mutant with pleotropic
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-3 46 Os11g0241832 9639.m01268 - - 7e-2 At1g66890 - C.G. S.X.
0.02 2e-5 52 Os05g0569800 AK063413.1 - Conserved hypothetical protein 4e-5 At3g02950 - C.G. S.X.
0.02 1e-3 46 Os01g0751600 AK108569.1 - Conserved hypothetical protein 9e-7 At5g50890 - C.G. S.X.
0.02 1e-3 46 Os09g0314500 9637.m01163 - RNA-binding region RNP-1 (RNA recognition motif)domain containing protein 5e-1 At5g44570 unknown protein C.G. S.X.
0.02 6e-3 44 Os01g0174000 9629.m00723 - Protein HY5 (AtbZIP56) 1e-3 At5g11260 HY5 (ELONGATED HYPOCOTYL 5) C.G. S.X.
0.02 6e-3 44 Os03g0765200 AK069581.1 - Peptidase S26A, signal peptidase I family protein 1e+0 At5g54430 universal stress protein (USP) family protein C.G. S.X.
0.02 6e-3 44 Os12g0108600 9640.m00078 - Protein phosphatase 2C-like domain containingprotein 5e-2 At4g32950 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-1 36 Arabidopsis thaliana At5g43410 834360 ethylene-responsive factor, putative encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. - - - C.G. S.X.
0.09 6e-5 50 Glycine max Gma.12747.1.A1_at CD396345 - - 1e-2 At4g28590 unknown protein C.G. S.X.
0.35 2e-132 472 Hordeum vulgare Contig14686_at Contig14686 - - 1e-8 At4g28590 unknown protein C.G. S.X.
0.12 3e-10 67 Populus trichocarpa PtpAffx.212037.1.S1_at pmrna23630 hypothetical protein - 7e-29 At4g28590 unknown protein C.G. S.X.
0.03 5e-2 40 Triticum aestivum TaAffx.128560.1.S1_at CA699137 Cold shock domain protein 3 - 6e-7 At4g38680 GRP2 (GLYCINE RICH PROTEIN 2) C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1622773_at CF605812 hypothetical protein LOC100253381 - 2e-2 At4g15975 protein binding / zinc ion binding C.G. S.X.
0.02 7e-2 38 Zea mays Zm.13668.1.A1_at AY107056.1 - - 8e-1 At2g21490 LEA (DEHYDRIN LEA) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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